Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SMARCA2P51531 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC31.87■■■□□ 2.69
SMARCA2P51531 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
SMARCA2P51531 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC31.87■■■□□ 2.69
SMARCA2P51531 MRPL20P1-201ENST00000400819 433 ntBASIC31.87■■■□□ 2.69
SMARCA2P51531 FAM58CP-201ENST00000435741 640 ntBASIC31.87■■■□□ 2.69
SMARCA2P51531 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC31.87■■■□□ 2.69
SMARCA2P51531 AC004790.2-201ENST00000623588 572 ntBASIC31.87■■■□□ 2.69
SMARCA2P51531 USP48-205ENST00000421625 2818 ntTSL 2 BASIC31.87■■■□□ 2.69
SMARCA2P51531 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
SMARCA2P51531 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC31.86■■■□□ 2.69
SMARCA2P51531 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
SMARCA2P51531 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
SMARCA2P51531 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC31.86■■■□□ 2.69
SMARCA2P51531 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC31.86■■■□□ 2.69
SMARCA2P51531 AC103564.2-201ENST00000432853 1299 ntBASIC31.86■■■□□ 2.69
SMARCA2P51531 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC31.86■■■□□ 2.69
SMARCA2P51531 CYB561-217ENST00000582997 877 ntTSL 5 BASIC31.86■■■□□ 2.69
SMARCA2P51531 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC31.86■■■□□ 2.69
SMARCA2P51531 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC31.86■■■□□ 2.69
SMARCA2P51531 AC091812.2-201ENST00000619081 385 ntBASIC31.86■■■□□ 2.69
SMARCA2P51531 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
SMARCA2P51531 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC31.86■■■□□ 2.69
SMARCA2P51531 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC31.86■■■□□ 2.69
SMARCA2P51531 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
SMARCA2P51531 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC31.86■■■□□ 2.69
SMARCA2P51531 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC31.86■■■□□ 2.69
SMARCA2P51531 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SMARCA2P51531 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
SMARCA2P51531 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
SMARCA2P51531 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC31.85■■■□□ 2.69
SMARCA2P51531 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC31.85■■■□□ 2.69
SMARCA2P51531 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC31.85■■■□□ 2.69
SMARCA2P51531 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
SMARCA2P51531 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SMARCA2P51531 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SMARCA2P51531 GID4-202ENST00000376345 1391 ntTSL 3 BASIC31.85■■■□□ 2.69
SMARCA2P51531 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC31.85■■■□□ 2.69
SMARCA2P51531 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC31.85■■■□□ 2.69
SMARCA2P51531 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC31.85■■■□□ 2.69
SMARCA2P51531 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC31.85■■■□□ 2.69
SMARCA2P51531 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
SMARCA2P51531 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC31.85■■■□□ 2.69
SMARCA2P51531 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC31.84■■■□□ 2.69
SMARCA2P51531 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
SMARCA2P51531 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
SMARCA2P51531 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC31.84■■■□□ 2.69
SMARCA2P51531 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC31.84■■■□□ 2.69
SMARCA2P51531 KLK8-202ENST00000320838 456 ntTSL 5 BASIC31.84■■■□□ 2.69
SMARCA2P51531 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
SMARCA2P51531 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC31.84■■■□□ 2.69
SMARCA2P51531 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC31.84■■■□□ 2.69
SMARCA2P51531 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC31.84■■■□□ 2.69
SMARCA2P51531 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
SMARCA2P51531 AL499627.1-201ENST00000569373 2188 ntBASIC31.84■■■□□ 2.69
SMARCA2P51531 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SMARCA2P51531 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC31.84■■■□□ 2.69
SMARCA2P51531 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SMARCA2P51531 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCA2P51531 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCA2P51531 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCA2P51531 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCA2P51531 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC31.83■■■□□ 2.69
SMARCA2P51531 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCA2P51531 HLA-J-202ENST00000469281 1241 ntBASIC31.83■■■□□ 2.69
SMARCA2P51531 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCA2P51531 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC31.83■■■□□ 2.69
SMARCA2P51531 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCA2P51531 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCA2P51531 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCA2P51531 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
SMARCA2P51531 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCA2P51531 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC31.83■■■□□ 2.69
SMARCA2P51531 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCA2P51531 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
SMARCA2P51531 AC132938.5-201ENST00000624980 1813 ntBASIC31.82■■■□□ 2.69
SMARCA2P51531 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
SMARCA2P51531 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC31.82■■■□□ 2.68
SMARCA2P51531 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
SMARCA2P51531 PAWRP1-201ENST00000451083 565 ntBASIC31.82■■■□□ 2.68
SMARCA2P51531 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC31.82■■■□□ 2.68
SMARCA2P51531 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC31.82■■■□□ 2.68
SMARCA2P51531 AC096734.2-201ENST00000562054 433 ntBASIC31.82■■■□□ 2.68
SMARCA2P51531 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC31.82■■■□□ 2.68
SMARCA2P51531 AC004877.2-201ENST00000623941 599 ntBASIC31.82■■■□□ 2.68
SMARCA2P51531 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SMARCA2P51531 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
SMARCA2P51531 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SMARCA2P51531 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
SMARCA2P51531 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
SMARCA2P51531 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
SMARCA2P51531 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
SMARCA2P51531 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC31.81■■■□□ 2.68
SMARCA2P51531 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
SMARCA2P51531 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
SMARCA2P51531 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC31.81■■■□□ 2.68
SMARCA2P51531 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
SMARCA2P51531 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC31.81■■■□□ 2.68
SMARCA2P51531 S100A2-206ENST00000497140 697 ntTSL 2 BASIC31.81■■■□□ 2.68
SMARCA2P51531 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC31.81■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms