Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CENPFP49454 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.27■□□□□ 0.84
CENPFP49454 AC009154.2-201ENST00000621177 724 ntBASIC20.27■□□□□ 0.84
CENPFP49454 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.27■□□□□ 0.84
CENPFP49454 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CENPFP49454 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CENPFP49454 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.83
CENPFP49454 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CENPFP49454 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CENPFP49454 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.27■□□□□ 0.83
CENPFP49454 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CENPFP49454 MIR4745-201ENST00000577608 62 ntBASIC20.27■□□□□ 0.83
CENPFP49454 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.27■□□□□ 0.83
CENPFP49454 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.27■□□□□ 0.83
CENPFP49454 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CENPFP49454 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CENPFP49454 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.26■□□□□ 0.83
CENPFP49454 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CENPFP49454 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CENPFP49454 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CENPFP49454 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.26■□□□□ 0.83
CENPFP49454 DUX4L17-201ENST00000557360 1267 ntBASIC20.26■□□□□ 0.83
CENPFP49454 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CENPFP49454 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.26■□□□□ 0.83
CENPFP49454 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CENPFP49454 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.26■□□□□ 0.83
CENPFP49454 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CENPFP49454 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.26■□□□□ 0.83
CENPFP49454 HLA-V-201ENST00000429037 534 ntBASIC20.26■□□□□ 0.83
CENPFP49454 AC093520.2-201ENST00000561830 333 ntBASIC20.26■□□□□ 0.83
CENPFP49454 OR7E47P-204ENST00000575924 449 ntBASIC20.26■□□□□ 0.83
CENPFP49454 AC091812.2-201ENST00000619081 385 ntBASIC20.26■□□□□ 0.83
CENPFP49454 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.26■□□□□ 0.83
CENPFP49454 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CENPFP49454 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.26■□□□□ 0.83
CENPFP49454 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CENPFP49454 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.26■□□□□ 0.83
CENPFP49454 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CENPFP49454 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
CENPFP49454 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.25■□□□□ 0.83
CENPFP49454 AC023141.5-201ENST00000458585 616 ntBASIC20.25■□□□□ 0.83
CENPFP49454 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.25■□□□□ 0.83
CENPFP49454 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.25■□□□□ 0.83
CENPFP49454 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.25■□□□□ 0.83
CENPFP49454 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CENPFP49454 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CENPFP49454 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.25■□□□□ 0.83
CENPFP49454 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CENPFP49454 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.25■□□□□ 0.83
CENPFP49454 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.25■□□□□ 0.83
CENPFP49454 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CENPFP49454 MIR149-201ENST00000384879 89 ntBASIC20.25■□□□□ 0.83
CENPFP49454 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CENPFP49454 AC092474.2-201ENST00000424288 719 ntBASIC20.25■□□□□ 0.83
CENPFP49454 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.25■□□□□ 0.83
CENPFP49454 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.25■□□□□ 0.83
CENPFP49454 AC005593.1-201ENST00000624894 515 ntBASIC20.25■□□□□ 0.83
CENPFP49454 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.25■□□□□ 0.83
CENPFP49454 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CENPFP49454 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.25■□□□□ 0.83
CENPFP49454 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.25■□□□□ 0.83
CENPFP49454 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CENPFP49454 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CENPFP49454 CEND1P1-201ENST00000451006 455 ntBASIC20.25■□□□□ 0.83
CENPFP49454 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.25■□□□□ 0.83
CENPFP49454 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.25■□□□□ 0.83
CENPFP49454 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.25■□□□□ 0.83
CENPFP49454 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CENPFP49454 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CENPFP49454 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CENPFP49454 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CENPFP49454 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CENPFP49454 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.24■□□□□ 0.83
CENPFP49454 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.24■□□□□ 0.83
CENPFP49454 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.24■□□□□ 0.83
CENPFP49454 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CENPFP49454 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.24■□□□□ 0.83
CENPFP49454 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CENPFP49454 AC015922.1-201ENST00000421102 1152 ntBASIC20.24■□□□□ 0.83
CENPFP49454 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CENPFP49454 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CENPFP49454 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CENPFP49454 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CENPFP49454 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CENPFP49454 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CENPFP49454 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
CENPFP49454 AC063926.2-201ENST00000623766 1308 ntBASIC20.24■□□□□ 0.83
CENPFP49454 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CENPFP49454 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
CENPFP49454 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CENPFP49454 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CENPFP49454 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CENPFP49454 MIR661-201ENST00000384842 89 ntBASIC20.24■□□□□ 0.83
CENPFP49454 KRT19P2-202ENST00000557173 1012 ntBASIC20.24■□□□□ 0.83
CENPFP49454 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CENPFP49454 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.24■□□□□ 0.83
CENPFP49454 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.24■□□□□ 0.83
CENPFP49454 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CENPFP49454 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CENPFP49454 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms