Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.22■□□□□ 0.67
SSR1P43307 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SSR1P43307 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.22■□□□□ 0.67
SSR1P43307 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.22■□□□□ 0.67
SSR1P43307 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 TSPY14P-201ENST00000303979 915 ntBASIC19.22■□□□□ 0.67
SSR1P43307 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
SSR1P43307 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.22■□□□□ 0.67
SSR1P43307 AC093827.2-201ENST00000512654 315 ntBASIC19.22■□□□□ 0.67
SSR1P43307 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.22■□□□□ 0.67
SSR1P43307 WWOX-216ENST00000569818 525 ntBASIC19.22■□□□□ 0.67
SSR1P43307 AC138028.4-201ENST00000564984 1845 ntBASIC19.22■□□□□ 0.67
SSR1P43307 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.22■□□□□ 0.67
SSR1P43307 HOXB1-202ENST00000577092 1414 ntBASIC19.22■□□□□ 0.67
SSR1P43307 AL096828.2-201ENST00000567259 1965 ntBASIC19.22■□□□□ 0.67
SSR1P43307 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.22■□□□□ 0.67
SSR1P43307 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SSR1P43307 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
SSR1P43307 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SSR1P43307 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSR1P43307 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSR1P43307 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSR1P43307 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSR1P43307 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSR1P43307 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.21■□□□□ 0.67
SSR1P43307 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.21■□□□□ 0.67
SSR1P43307 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSR1P43307 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSR1P43307 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.21■□□□□ 0.67
SSR1P43307 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSR1P43307 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSR1P43307 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
SSR1P43307 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSR1P43307 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.21■□□□□ 0.67
SSR1P43307 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.21■□□□□ 0.67
SSR1P43307 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.21■□□□□ 0.67
SSR1P43307 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.21■□□□□ 0.67
SSR1P43307 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SSR1P43307 AC010653.2-201ENST00000623505 997 ntBASIC19.21■□□□□ 0.67
SSR1P43307 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSR1P43307 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSR1P43307 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSR1P43307 PHGDH-209ENST00000641074 1780 ntBASIC19.21■□□□□ 0.67
SSR1P43307 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SSR1P43307 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SSR1P43307 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSR1P43307 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSR1P43307 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.2■□□□□ 0.66
SSR1P43307 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR1P43307 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR1P43307 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR1P43307 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.2■□□□□ 0.66
SSR1P43307 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSR1P43307 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSR1P43307 KRT8P7-201ENST00000533003 1432 ntBASIC19.2■□□□□ 0.66
SSR1P43307 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR1P43307 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR1P43307 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSR1P43307 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.2■□□□□ 0.66
SSR1P43307 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR1P43307 ECEL1P2-202ENST00000465689 757 ntBASIC19.2■□□□□ 0.66
SSR1P43307 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.2■□□□□ 0.66
SSR1P43307 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.2■□□□□ 0.66
SSR1P43307 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SSR1P43307 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSR1P43307 AC010947.1-201ENST00000623454 693 ntBASIC19.2■□□□□ 0.66
SSR1P43307 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SSR1P43307 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SSR1P43307 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR1P43307 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSR1P43307 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR1P43307 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SSR1P43307 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSR1P43307 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
SSR1P43307 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR1P43307 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
SSR1P43307 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SSR1P43307 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SSR1P43307 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms