Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A1P43005 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC1A1P43005 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A1P43005 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A1P43005 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SLC1A1P43005 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A1P43005 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC1A1P43005 LINC01568-207ENST00000641790 1380 ntBASIC18.93■□□□□ 0.62
SLC1A1P43005 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A1P43005 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A1P43005 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A1P43005 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC1A1P43005 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A1P43005 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC1A1P43005 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A1P43005 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A1P43005 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A1P43005 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A1P43005 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A1P43005 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A1P43005 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A1P43005 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC1A1P43005 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A1P43005 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC1A1P43005 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.92■□□□□ 0.62
SLC1A1P43005 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A1P43005 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC1A1P43005 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC1A1P43005 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC1A1P43005 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC1A1P43005 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC1A1P43005 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A1P43005 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SLC1A1P43005 KRT18P22-201ENST00000402024 1347 ntBASIC18.92■□□□□ 0.62
SLC1A1P43005 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A1P43005 LINC00167-201ENST00000530583 1419 ntBASIC18.91■□□□□ 0.62
SLC1A1P43005 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A1P43005 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A1P43005 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
SLC1A1P43005 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A1P43005 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A1P43005 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC1A1P43005 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A1P43005 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A1P43005 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC1A1P43005 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A1P43005 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.91■□□□□ 0.62
SLC1A1P43005 AC113404.2-201ENST00000507884 177 ntBASIC18.91■□□□□ 0.62
SLC1A1P43005 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.91■□□□□ 0.62
SLC1A1P43005 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A1P43005 AL157888.1-201ENST00000631930 593 ntBASIC18.91■□□□□ 0.62
SLC1A1P43005 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A1P43005 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A1P43005 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A1P43005 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A1P43005 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC1A1P43005 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC1A1P43005 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A1P43005 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SLC1A1P43005 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC1A1P43005 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A1P43005 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC1A1P43005 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC1A1P43005 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A1P43005 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A1P43005 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A1P43005 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A1P43005 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A1P43005 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A1P43005 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SLC1A1P43005 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC1A1P43005 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SLC1A1P43005 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
SLC1A1P43005 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SLC1A1P43005 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A1P43005 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SLC1A1P43005 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A1P43005 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A1P43005 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC1A1P43005 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A1P43005 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A1P43005 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SLC1A1P43005 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A1P43005 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A1P43005 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC1A1P43005 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A1P43005 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
SLC1A1P43005 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A1P43005 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.89■□□□□ 0.62
SLC1A1P43005 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SLC1A1P43005 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
SLC1A1P43005 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC1A1P43005 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC1A1P43005 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A1P43005 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A1P43005 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A1P43005 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A1P43005 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A1P43005 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A1P43005 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms