Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.9□□□□□ -0.02
SNCAP37840 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.9□□□□□ -0.02
SNCAP37840 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.9□□□□□ -0.02
SNCAP37840 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.9□□□□□ -0.02
SNCAP37840 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNCAP37840 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
SNCAP37840 KRT8P11-201ENST00000409686 1436 ntBASIC14.9□□□□□ -0.02
SNCAP37840 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SNCAP37840 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.9□□□□□ -0.02
SNCAP37840 AC112777.1-201ENST00000540175 1423 ntBASIC14.9□□□□□ -0.02
SNCAP37840 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.9□□□□□ -0.02
SNCAP37840 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.9□□□□□ -0.02
SNCAP37840 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SNCAP37840 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SNCAP37840 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SNCAP37840 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SNCAP37840 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.9□□□□□ -0.02
SNCAP37840 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNCAP37840 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
SNCAP37840 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SNCAP37840 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SNCAP37840 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SNCAP37840 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.89□□□□□ -0.03
SNCAP37840 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SNCAP37840 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
SNCAP37840 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.89□□□□□ -0.03
SNCAP37840 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.89□□□□□ -0.03
SNCAP37840 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.89□□□□□ -0.03
SNCAP37840 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
SNCAP37840 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.89□□□□□ -0.03
SNCAP37840 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SNCAP37840 AC110285.5-201ENST00000611501 352 ntBASIC14.89□□□□□ -0.03
SNCAP37840 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.89□□□□□ -0.03
SNCAP37840 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.89□□□□□ -0.03
SNCAP37840 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.89□□□□□ -0.03
SNCAP37840 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SNCAP37840 KRT8P3-201ENST00000519669 1449 ntBASIC14.89□□□□□ -0.03
SNCAP37840 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SNCAP37840 CICP6-201ENST00000457191 2729 ntBASIC14.89□□□□□ -0.03
SNCAP37840 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.89□□□□□ -0.03
SNCAP37840 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SNCAP37840 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.89□□□□□ -0.03
SNCAP37840 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SNCAP37840 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.89□□□□□ -0.03
SNCAP37840 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SNCAP37840 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
SNCAP37840 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SNCAP37840 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SNCAP37840 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SNCAP37840 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.88□□□□□ -0.03
SNCAP37840 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNCAP37840 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SNCAP37840 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNCAP37840 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNCAP37840 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
SNCAP37840 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.88□□□□□ -0.03
SNCAP37840 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SNCAP37840 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNCAP37840 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SNCAP37840 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNCAP37840 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNCAP37840 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNCAP37840 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SNCAP37840 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SNCAP37840 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.88□□□□□ -0.03
SNCAP37840 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.88□□□□□ -0.03
SNCAP37840 AC233263.1-201ENST00000578059 224 ntBASIC14.88□□□□□ -0.03
SNCAP37840 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SNCAP37840 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SNCAP37840 AC068587.9-201ENST00000641814 219 ntBASIC14.88□□□□□ -0.03
SNCAP37840 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SNCAP37840 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.88□□□□□ -0.03
SNCAP37840 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.88□□□□□ -0.03
SNCAP37840 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.88□□□□□ -0.03
SNCAP37840 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.88□□□□□ -0.03
SNCAP37840 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNCAP37840 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SNCAP37840 KRT8P32-201ENST00000512863 1461 ntBASIC14.88□□□□□ -0.03
SNCAP37840 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SNCAP37840 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SNCAP37840 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms