Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LCN1P31025 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.73■□□□□ 0.27
LCN1P31025 AC079602.3-201ENST00000623931 403 ntBASIC16.73■□□□□ 0.27
LCN1P31025 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.73■□□□□ 0.27
LCN1P31025 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LCN1P31025 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LCN1P31025 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LCN1P31025 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
LCN1P31025 PKD1P1-201ENST00000458669 6805 ntBASIC16.73■□□□□ 0.27
LCN1P31025 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.72■□□□□ 0.27
LCN1P31025 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
LCN1P31025 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LCN1P31025 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCN1P31025 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCN1P31025 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.72■□□□□ 0.27
LCN1P31025 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LCN1P31025 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LCN1P31025 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.72■□□□□ 0.27
LCN1P31025 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.72■□□□□ 0.27
LCN1P31025 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LCN1P31025 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.72■□□□□ 0.27
LCN1P31025 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LCN1P31025 KRT18P48-201ENST00000434763 852 ntBASIC16.72■□□□□ 0.27
LCN1P31025 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCN1P31025 DUX4L26-201ENST00000489078 1255 ntBASIC16.72■□□□□ 0.27
LCN1P31025 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.72■□□□□ 0.27
LCN1P31025 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.72■□□□□ 0.27
LCN1P31025 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.72■□□□□ 0.27
LCN1P31025 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.72■□□□□ 0.27
LCN1P31025 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LCN1P31025 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LCN1P31025 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCN1P31025 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCN1P31025 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LCN1P31025 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LCN1P31025 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCN1P31025 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LCN1P31025 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LCN1P31025 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCN1P31025 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCN1P31025 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCN1P31025 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LCN1P31025 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LCN1P31025 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LCN1P31025 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.71■□□□□ 0.27
LCN1P31025 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCN1P31025 AL096828.2-201ENST00000567259 1965 ntBASIC16.71■□□□□ 0.27
LCN1P31025 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LCN1P31025 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LCN1P31025 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCN1P31025 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.71■□□□□ 0.27
LCN1P31025 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.71■□□□□ 0.27
LCN1P31025 HBZP1-201ENST00000354915 429 ntBASIC16.71■□□□□ 0.27
LCN1P31025 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCN1P31025 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.71■□□□□ 0.27
LCN1P31025 MIR662-201ENST00000384847 95 ntBASIC16.71■□□□□ 0.27
LCN1P31025 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCN1P31025 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LCN1P31025 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LCN1P31025 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.71■□□□□ 0.27
LCN1P31025 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.71■□□□□ 0.27
LCN1P31025 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.71■□□□□ 0.27
LCN1P31025 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.71■□□□□ 0.27
LCN1P31025 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.71■□□□□ 0.27
LCN1P31025 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCN1P31025 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LCN1P31025 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LCN1P31025 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCN1P31025 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCN1P31025 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCN1P31025 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCN1P31025 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCN1P31025 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCN1P31025 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LCN1P31025 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.71■□□□□ 0.26
LCN1P31025 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.7■□□□□ 0.26
LCN1P31025 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCN1P31025 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCN1P31025 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LCN1P31025 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
LCN1P31025 NOC2LP2-201ENST00000407594 1944 ntBASIC16.7■□□□□ 0.26
LCN1P31025 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LCN1P31025 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.7■□□□□ 0.26
LCN1P31025 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LCN1P31025 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LCN1P31025 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
LCN1P31025 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.7■□□□□ 0.26
LCN1P31025 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LCN1P31025 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LCN1P31025 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCN1P31025 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LCN1P31025 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCN1P31025 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCN1P31025 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.7■□□□□ 0.26
LCN1P31025 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.7■□□□□ 0.26
LCN1P31025 FAM210CP-201ENST00000445714 574 ntBASIC16.7■□□□□ 0.26
LCN1P31025 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.7■□□□□ 0.26
LCN1P31025 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.7■□□□□ 0.26
LCN1P31025 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.7■□□□□ 0.26
LCN1P31025 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms