Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
EPHA3P29320 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA3P29320 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA3P29320 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.6■□□□□ 0.41
EPHA3P29320 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.6■□□□□ 0.41
EPHA3P29320 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA3P29320 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
EPHA3P29320 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA3P29320 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
EPHA3P29320 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA3P29320 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
EPHA3P29320 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA3P29320 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA3P29320 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.6■□□□□ 0.41
EPHA3P29320 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA3P29320 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.6■□□□□ 0.41
EPHA3P29320 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.6■□□□□ 0.41
EPHA3P29320 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.6■□□□□ 0.41
EPHA3P29320 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA3P29320 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHA3P29320 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
EPHA3P29320 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.59■□□□□ 0.41
EPHA3P29320 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA3P29320 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.59■□□□□ 0.41
EPHA3P29320 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA3P29320 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA3P29320 LINC00602-201ENST00000629776 2065 ntBASIC17.59■□□□□ 0.41
EPHA3P29320 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
EPHA3P29320 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.59■□□□□ 0.41
EPHA3P29320 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA3P29320 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA3P29320 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA3P29320 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
EPHA3P29320 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA3P29320 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
EPHA3P29320 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.59■□□□□ 0.41
EPHA3P29320 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.59■□□□□ 0.41
EPHA3P29320 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.59■□□□□ 0.41
EPHA3P29320 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHA3P29320 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.59■□□□□ 0.41
EPHA3P29320 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.59■□□□□ 0.41
EPHA3P29320 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA3P29320 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA3P29320 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
EPHA3P29320 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA3P29320 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
EPHA3P29320 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
EPHA3P29320 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
EPHA3P29320 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
EPHA3P29320 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.59■□□□□ 0.41
EPHA3P29320 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA3P29320 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA3P29320 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
EPHA3P29320 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHA3P29320 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHA3P29320 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.58■□□□□ 0.41
EPHA3P29320 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHA3P29320 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHA3P29320 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
EPHA3P29320 HOXB1-202ENST00000577092 1414 ntBASIC17.58■□□□□ 0.41
EPHA3P29320 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EPHA3P29320 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHA3P29320 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHA3P29320 ID1-201ENST00000376105 1233 ntBASIC17.58■□□□□ 0.4
EPHA3P29320 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.58■□□□□ 0.4
EPHA3P29320 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
EPHA3P29320 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.58■□□□□ 0.4
EPHA3P29320 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EPHA3P29320 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.58■□□□□ 0.4
EPHA3P29320 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.58■□□□□ 0.4
EPHA3P29320 DGCR10-201ENST00000609839 495 ntBASIC17.58■□□□□ 0.4
EPHA3P29320 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.58■□□□□ 0.4
EPHA3P29320 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.58■□□□□ 0.4
EPHA3P29320 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
EPHA3P29320 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHA3P29320 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHA3P29320 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.58■□□□□ 0.4
EPHA3P29320 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA3P29320 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA3P29320 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA3P29320 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA3P29320 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.57■□□□□ 0.4
EPHA3P29320 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA3P29320 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA3P29320 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA3P29320 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
EPHA3P29320 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA3P29320 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.57■□□□□ 0.4
EPHA3P29320 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.57■□□□□ 0.4
EPHA3P29320 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
EPHA3P29320 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.57■□□□□ 0.4
EPHA3P29320 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.57■□□□□ 0.4
EPHA3P29320 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA3P29320 KRT18P23-201ENST00000435622 1283 ntBASIC17.57■□□□□ 0.4
EPHA3P29320 CA15P1-201ENST00000481698 905 ntBASIC17.57■□□□□ 0.4
EPHA3P29320 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA3P29320 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.57■□□□□ 0.4
EPHA3P29320 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.57■□□□□ 0.4
EPHA3P29320 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.57■□□□□ 0.4
EPHA3P29320 CD177P1-201ENST00000606252 935 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms