Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD58P19256 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CD58P19256 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD58P19256 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD58P19256 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD58P19256 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD58P19256 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD58P19256 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.4■□□□□ 0.7
CD58P19256 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.4■□□□□ 0.7
CD58P19256 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.4■□□□□ 0.7
CD58P19256 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.4■□□□□ 0.7
CD58P19256 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.4■□□□□ 0.7
CD58P19256 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD58P19256 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.4■□□□□ 0.7
CD58P19256 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CD58P19256 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.4■□□□□ 0.7
CD58P19256 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.4■□□□□ 0.7
CD58P19256 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.4■□□□□ 0.7
CD58P19256 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.4■□□□□ 0.7
CD58P19256 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.4■□□□□ 0.7
CD58P19256 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD58P19256 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD58P19256 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD58P19256 AC093010.1-201ENST00000473625 1624 ntBASIC19.4■□□□□ 0.7
CD58P19256 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD58P19256 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD58P19256 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD58P19256 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CD58P19256 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CD58P19256 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CD58P19256 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CD58P19256 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CD58P19256 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CD58P19256 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CD58P19256 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.39■□□□□ 0.7
CD58P19256 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CD58P19256 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CD58P19256 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CD58P19256 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD58P19256 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD58P19256 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CD58P19256 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD58P19256 IGHGP-201ENST00000390555 1178 ntBASIC19.39■□□□□ 0.69
CD58P19256 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.39■□□□□ 0.69
CD58P19256 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.39■□□□□ 0.69
CD58P19256 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD58P19256 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.39■□□□□ 0.69
CD58P19256 AC005332.3-201ENST00000589904 676 ntBASIC19.39■□□□□ 0.69
CD58P19256 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CD58P19256 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.39■□□□□ 0.69
CD58P19256 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD58P19256 KRT89P-201ENST00000620027 1478 ntBASIC19.39■□□□□ 0.69
CD58P19256 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
CD58P19256 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CD58P19256 Z83836.1-201ENST00000624605 1642 ntBASIC19.39■□□□□ 0.69
CD58P19256 AC132938.6-201ENST00000623828 1655 ntBASIC19.39■□□□□ 0.69
CD58P19256 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD58P19256 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CD58P19256 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD58P19256 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.39■□□□□ 0.69
CD58P19256 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD58P19256 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.39■□□□□ 0.69
CD58P19256 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
CD58P19256 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD58P19256 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD58P19256 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.39■□□□□ 0.69
CD58P19256 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CD58P19256 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD58P19256 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CD58P19256 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD58P19256 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD58P19256 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD58P19256 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD58P19256 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD58P19256 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CD58P19256 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD58P19256 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.38■□□□□ 0.69
CD58P19256 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.38■□□□□ 0.69
CD58P19256 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.38■□□□□ 0.69
CD58P19256 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.38■□□□□ 0.69
CD58P19256 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.38■□□□□ 0.69
CD58P19256 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.38■□□□□ 0.69
CD58P19256 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.38■□□□□ 0.69
CD58P19256 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
CD58P19256 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CD58P19256 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.38■□□□□ 0.69
CD58P19256 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD58P19256 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.38■□□□□ 0.69
CD58P19256 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD58P19256 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.38■□□□□ 0.69
CD58P19256 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD58P19256 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD58P19256 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CD58P19256 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.37■□□□□ 0.69
CD58P19256 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD58P19256 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.37■□□□□ 0.69
CD58P19256 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CD58P19256 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD58P19256 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD58P19256 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms