Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.1■□□□□ 0.33
NCK1P16333 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.1■□□□□ 0.33
NCK1P16333 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.1■□□□□ 0.33
NCK1P16333 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCK1P16333 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCK1P16333 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.1■□□□□ 0.33
NCK1P16333 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCK1P16333 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCK1P16333 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCK1P16333 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.09■□□□□ 0.33
NCK1P16333 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCK1P16333 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCK1P16333 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCK1P16333 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
NCK1P16333 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.09■□□□□ 0.33
NCK1P16333 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCK1P16333 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.09■□□□□ 0.33
NCK1P16333 MIR149-201ENST00000384879 89 ntBASIC17.09■□□□□ 0.33
NCK1P16333 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCK1P16333 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCK1P16333 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.09■□□□□ 0.33
NCK1P16333 RN7SL471P-201ENST00000580476 299 ntBASIC17.09■□□□□ 0.33
NCK1P16333 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.09■□□□□ 0.33
NCK1P16333 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.09■□□□□ 0.33
NCK1P16333 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.09■□□□□ 0.33
NCK1P16333 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NCK1P16333 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.09■□□□□ 0.33
NCK1P16333 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.09■□□□□ 0.33
NCK1P16333 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCK1P16333 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCK1P16333 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCK1P16333 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NCK1P16333 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCK1P16333 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCK1P16333 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.09■□□□□ 0.33
NCK1P16333 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCK1P16333 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCK1P16333 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCK1P16333 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCK1P16333 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCK1P16333 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NCK1P16333 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCK1P16333 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
NCK1P16333 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
NCK1P16333 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCK1P16333 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCK1P16333 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCK1P16333 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCK1P16333 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.08■□□□□ 0.33
NCK1P16333 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
NCK1P16333 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCK1P16333 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
NCK1P16333 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.08■□□□□ 0.33
NCK1P16333 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCK1P16333 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCK1P16333 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NCK1P16333 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.08■□□□□ 0.32
NCK1P16333 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.08■□□□□ 0.32
NCK1P16333 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.08■□□□□ 0.32
NCK1P16333 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCK1P16333 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCK1P16333 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCK1P16333 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
NCK1P16333 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCK1P16333 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCK1P16333 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCK1P16333 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCK1P16333 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NCK1P16333 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NCK1P16333 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NCK1P16333 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCK1P16333 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.07■□□□□ 0.32
NCK1P16333 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCK1P16333 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCK1P16333 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCK1P16333 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NCK1P16333 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NCK1P16333 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCK1P16333 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCK1P16333 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCK1P16333 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCK1P16333 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NCK1P16333 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
NCK1P16333 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCK1P16333 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.07■□□□□ 0.32
NCK1P16333 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.07■□□□□ 0.32
NCK1P16333 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCK1P16333 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
NCK1P16333 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCK1P16333 CROCCP2-202ENST00000412962 2773 ntBASIC17.07■□□□□ 0.32
NCK1P16333 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.07■□□□□ 0.32
NCK1P16333 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.07■□□□□ 0.32
NCK1P16333 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCK1P16333 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCK1P16333 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCK1P16333 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCK1P16333 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
NCK1P16333 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.07■□□□□ 0.32
NCK1P16333 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.07■□□□□ 0.32
NCK1P16333 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms