Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPRP12270 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPRP12270 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.87■□□□□ 0.29
TPRP12270 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.87■□□□□ 0.29
TPRP12270 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.87■□□□□ 0.29
TPRP12270 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.86■□□□□ 0.29
TPRP12270 SIGLEC16-201ENST00000599858 1437 ntBASIC16.86■□□□□ 0.29
TPRP12270 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRP12270 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TPRP12270 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRP12270 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRP12270 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TPRP12270 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.86■□□□□ 0.29
TPRP12270 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.86■□□□□ 0.29
TPRP12270 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPRP12270 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.86■□□□□ 0.29
TPRP12270 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.86■□□□□ 0.29
TPRP12270 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.86■□□□□ 0.29
TPRP12270 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TPRP12270 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
TPRP12270 SPTSSB-204ENST00000617024 1292 ntBASIC16.86■□□□□ 0.29
TPRP12270 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPRP12270 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TPRP12270 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TPRP12270 AP005212.1-201ENST00000581547 1997 ntBASIC16.86■□□□□ 0.29
TPRP12270 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TPRP12270 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPRP12270 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TPRP12270 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPRP12270 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
TPRP12270 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRP12270 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRP12270 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.86■□□□□ 0.29
TPRP12270 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.86■□□□□ 0.29
TPRP12270 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.86■□□□□ 0.29
TPRP12270 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.86■□□□□ 0.29
TPRP12270 AC140878.1-201ENST00000565277 250 ntBASIC16.86■□□□□ 0.29
TPRP12270 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.86■□□□□ 0.29
TPRP12270 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.86■□□□□ 0.29
TPRP12270 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPRP12270 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRP12270 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPRP12270 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPRP12270 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TPRP12270 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.85■□□□□ 0.29
TPRP12270 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRP12270 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRP12270 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRP12270 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRP12270 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPRP12270 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.85■□□□□ 0.29
TPRP12270 BX005266.1-201ENST00000473402 457 ntBASIC16.85■□□□□ 0.29
TPRP12270 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.85■□□□□ 0.29
TPRP12270 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.85■□□□□ 0.29
TPRP12270 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.85■□□□□ 0.29
TPRP12270 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.85■□□□□ 0.29
TPRP12270 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPRP12270 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRP12270 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRP12270 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.85■□□□□ 0.29
TPRP12270 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRP12270 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.85■□□□□ 0.29
TPRP12270 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRP12270 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRP12270 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.85■□□□□ 0.29
TPRP12270 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TPRP12270 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPRP12270 AC003669.1-201ENST00000334569 611 ntBASIC16.85■□□□□ 0.29
TPRP12270 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.85■□□□□ 0.29
TPRP12270 AC068472.1-201ENST00000474589 881 ntBASIC16.85■□□□□ 0.29
TPRP12270 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.85■□□□□ 0.29
TPRP12270 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TPRP12270 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPRP12270 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.85■□□□□ 0.29
TPRP12270 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.85■□□□□ 0.29
TPRP12270 AP001059.3-201ENST00000619053 235 ntBASIC16.85■□□□□ 0.29
TPRP12270 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPRP12270 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.85■□□□□ 0.29
TPRP12270 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPRP12270 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPRP12270 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.84■□□□□ 0.29
TPRP12270 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TPRP12270 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TPRP12270 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.84■□□□□ 0.29
TPRP12270 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TPRP12270 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPRP12270 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.84■□□□□ 0.29
TPRP12270 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.84■□□□□ 0.29
TPRP12270 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.84■□□□□ 0.29
TPRP12270 PRYP5-201ENST00000451909 266 ntBASIC16.84■□□□□ 0.29
TPRP12270 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.84■□□□□ 0.29
TPRP12270 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.84■□□□□ 0.29
TPRP12270 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPRP12270 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPRP12270 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.84■□□□□ 0.29
TPRP12270 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPRP12270 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TPRP12270 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.84■□□□□ 0.29
TPRP12270 AC079776.2-201ENST00000641154 1609 ntBASIC16.84■□□□□ 0.29
TPRP12270 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms