Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RETP07949 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.2■□□□□ 0.5
RETP07949 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RETP07949 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
RETP07949 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RETP07949 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RETP07949 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.2■□□□□ 0.5
RETP07949 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RETP07949 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RETP07949 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RETP07949 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RETP07949 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.2■□□□□ 0.5
RETP07949 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RETP07949 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.2■□□□□ 0.5
RETP07949 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
RETP07949 AC112482.1-201ENST00000492080 688 ntBASIC18.2■□□□□ 0.5
RETP07949 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.2■□□□□ 0.5
RETP07949 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.2■□□□□ 0.5
RETP07949 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.2■□□□□ 0.5
RETP07949 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.2■□□□□ 0.5
RETP07949 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.2■□□□□ 0.5
RETP07949 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RETP07949 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RETP07949 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.2■□□□□ 0.5
RETP07949 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RETP07949 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RETP07949 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.2■□□□□ 0.5
RETP07949 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RETP07949 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.2■□□□□ 0.5
RETP07949 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.2■□□□□ 0.5
RETP07949 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.2■□□□□ 0.5
RETP07949 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RETP07949 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RETP07949 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RETP07949 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.19■□□□□ 0.5
RETP07949 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.19■□□□□ 0.5
RETP07949 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.19■□□□□ 0.5
RETP07949 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.19■□□□□ 0.5
RETP07949 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.19■□□□□ 0.5
RETP07949 AC009113.1-201ENST00000570267 2443 ntBASIC18.19■□□□□ 0.5
RETP07949 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RETP07949 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RETP07949 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RETP07949 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RETP07949 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.19■□□□□ 0.5
RETP07949 YBX2P1-201ENST00000394192 760 ntBASIC18.19■□□□□ 0.5
RETP07949 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RETP07949 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RETP07949 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RETP07949 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.19■□□□□ 0.5
RETP07949 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.19■□□□□ 0.5
RETP07949 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RETP07949 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
RETP07949 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.19■□□□□ 0.5
RETP07949 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.19■□□□□ 0.5
RETP07949 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.19■□□□□ 0.5
RETP07949 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RETP07949 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.19■□□□□ 0.5
RETP07949 AL031598.1-201ENST00000561511 1773 ntBASIC18.19■□□□□ 0.5
RETP07949 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RETP07949 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RETP07949 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RETP07949 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RETP07949 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RETP07949 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.18■□□□□ 0.5
RETP07949 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
RETP07949 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RETP07949 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RETP07949 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.18■□□□□ 0.5
RETP07949 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.18■□□□□ 0.5
RETP07949 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
RETP07949 KRT18P3-201ENST00000451602 1288 ntBASIC18.18■□□□□ 0.5
RETP07949 AC040169.1-201ENST00000565382 521 ntBASIC18.18■□□□□ 0.5
RETP07949 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.18■□□□□ 0.5
RETP07949 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.18■□□□□ 0.5
RETP07949 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.18■□□□□ 0.5
RETP07949 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.18■□□□□ 0.5
RETP07949 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RETP07949 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
RETP07949 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RETP07949 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms