Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CTSDP07339 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.02■□□□□ -0
CTSDP07339 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.02■□□□□ -0
CTSDP07339 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.02■□□□□ -0
CTSDP07339 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
CTSDP07339 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CTSDP07339 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.02■□□□□ -0
CTSDP07339 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
CTSDP07339 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.02■□□□□ -0
CTSDP07339 AP003097.1-201ENST00000530657 1135 ntBASIC15.02■□□□□ -0
CTSDP07339 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.02■□□□□ -0
CTSDP07339 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.02■□□□□ -0
CTSDP07339 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
CTSDP07339 AL031985.4-201ENST00000642138 673 ntBASIC15.02■□□□□ -0
CTSDP07339 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
CTSDP07339 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CTSDP07339 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CTSDP07339 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CTSDP07339 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CTSDP07339 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.02□□□□□ -0.01
CTSDP07339 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CTSDP07339 AC099343.3-201ENST00000605834 2503 ntBASIC15.02□□□□□ -0.01
CTSDP07339 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.02□□□□□ -0.01
CTSDP07339 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CTSDP07339 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.01□□□□□ -0.01
CTSDP07339 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTSDP07339 KRT16P1-201ENST00000399124 1418 ntBASIC15.01□□□□□ -0.01
CTSDP07339 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.01□□□□□ -0.01
CTSDP07339 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTSDP07339 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CTSDP07339 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.01□□□□□ -0.01
CTSDP07339 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CTSDP07339 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTSDP07339 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTSDP07339 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CTSDP07339 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTSDP07339 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.01□□□□□ -0.01
CTSDP07339 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTSDP07339 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CTSDP07339 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CTSDP07339 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTSDP07339 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTSDP07339 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTSDP07339 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.01□□□□□ -0.01
CTSDP07339 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.01□□□□□ -0.01
CTSDP07339 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.01□□□□□ -0.01
CTSDP07339 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CTSDP07339 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.01□□□□□ -0.01
CTSDP07339 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.01□□□□□ -0.01
CTSDP07339 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.01□□□□□ -0.01
CTSDP07339 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CTSDP07339 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CTSDP07339 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.01□□□□□ -0.01
CTSDP07339 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTSDP07339 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.01□□□□□ -0.01
CTSDP07339 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CTSDP07339 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTSDP07339 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.01□□□□□ -0.01
CTSDP07339 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTSDP07339 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CTSDP07339 CROCCP2-202ENST00000412962 2773 ntBASIC15.01□□□□□ -0.01
CTSDP07339 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CTSDP07339 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CTSDP07339 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15□□□□□ -0.01
CTSDP07339 AL118508.1-201ENST00000613502 2345 ntBASIC15□□□□□ -0.01
CTSDP07339 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15□□□□□ -0.01
CTSDP07339 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CTSDP07339 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CTSDP07339 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15□□□□□ -0.01
CTSDP07339 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15□□□□□ -0.01
CTSDP07339 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CTSDP07339 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CTSDP07339 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15□□□□□ -0.01
CTSDP07339 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15□□□□□ -0.01
CTSDP07339 AC133681.1-201ENST00000465482 601 ntBASIC15□□□□□ -0.01
CTSDP07339 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15□□□□□ -0.01
CTSDP07339 DUTP2-201ENST00000519164 463 ntBASIC15□□□□□ -0.01
CTSDP07339 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15□□□□□ -0.01
CTSDP07339 AC233263.1-201ENST00000578059 224 ntBASIC15□□□□□ -0.01
CTSDP07339 AC110285.5-201ENST00000611501 352 ntBASIC15□□□□□ -0.01
CTSDP07339 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CTSDP07339 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15□□□□□ -0.01
CTSDP07339 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15□□□□□ -0.01
CTSDP07339 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15□□□□□ -0.01
CTSDP07339 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CTSDP07339 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15□□□□□ -0.01
CTSDP07339 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CTSDP07339 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15□□□□□ -0.01
CTSDP07339 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15□□□□□ -0.01
CTSDP07339 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15□□□□□ -0.01
CTSDP07339 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CTSDP07339 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CTSDP07339 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CTSDP07339 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15□□□□□ -0.01
CTSDP07339 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 LINC01126-201ENST00000623515 1646 ntBASIC14.99□□□□□ -0.01
CTSDP07339 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.99□□□□□ -0.01
CTSDP07339 OR6D1P-203ENST00000641209 4860 ntBASIC14.99□□□□□ -0.01
CTSDP07339 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms