Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDKL5O76039 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDKL5O76039 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.02■□□□□ 0.96
CDKL5O76039 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDKL5O76039 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.02■□□□□ 0.96
CDKL5O76039 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.02■□□□□ 0.96
CDKL5O76039 RCN1P1-201ENST00000400413 996 ntBASIC21.02■□□□□ 0.96
CDKL5O76039 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.02■□□□□ 0.96
CDKL5O76039 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CDKL5O76039 AC092597.1-201ENST00000487352 616 ntBASIC21.02■□□□□ 0.96
CDKL5O76039 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.96
CDKL5O76039 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.02■□□□□ 0.96
CDKL5O76039 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CDKL5O76039 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CDKL5O76039 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDKL5O76039 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.02■□□□□ 0.96
CDKL5O76039 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDKL5O76039 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CDKL5O76039 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDKL5O76039 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDKL5O76039 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDKL5O76039 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDKL5O76039 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CDKL5O76039 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CDKL5O76039 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDKL5O76039 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDKL5O76039 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CDKL5O76039 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.02■□□□□ 0.95
CDKL5O76039 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.01■□□□□ 0.95
CDKL5O76039 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL5O76039 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CDKL5O76039 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CDKL5O76039 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL5O76039 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL5O76039 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL5O76039 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.01■□□□□ 0.95
CDKL5O76039 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL5O76039 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL5O76039 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL5O76039 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL5O76039 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL5O76039 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL5O76039 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL5O76039 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.01■□□□□ 0.95
CDKL5O76039 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.01■□□□□ 0.95
CDKL5O76039 AC104076.2-201ENST00000448912 469 ntBASIC21.01■□□□□ 0.95
CDKL5O76039 KRT18P38-201ENST00000449496 1282 ntBASIC21.01■□□□□ 0.95
CDKL5O76039 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.01■□□□□ 0.95
CDKL5O76039 AC063952.2-201ENST00000498792 1227 ntBASIC21.01■□□□□ 0.95
CDKL5O76039 LINC01238-205ENST00000567549 1107 ntBASIC21.01■□□□□ 0.95
CDKL5O76039 RN7SL850P-201ENST00000579959 291 ntBASIC21.01■□□□□ 0.95
CDKL5O76039 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.01■□□□□ 0.95
CDKL5O76039 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL5O76039 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL5O76039 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CDKL5O76039 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.01■□□□□ 0.95
CDKL5O76039 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.01■□□□□ 0.95
CDKL5O76039 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL5O76039 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL5O76039 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CDKL5O76039 GNAS-203ENST00000306120 1878 ntBASIC21.01■□□□□ 0.95
CDKL5O76039 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDKL5O76039 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDKL5O76039 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDKL5O76039 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CDKL5O76039 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDKL5O76039 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21■□□□□ 0.95
CDKL5O76039 HBZP1-201ENST00000354915 429 ntBASIC21■□□□□ 0.95
CDKL5O76039 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDKL5O76039 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21■□□□□ 0.95
CDKL5O76039 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDKL5O76039 AC112907.2-201ENST00000448639 330 ntBASIC21■□□□□ 0.95
CDKL5O76039 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CDKL5O76039 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21■□□□□ 0.95
CDKL5O76039 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21■□□□□ 0.95
CDKL5O76039 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21■□□□□ 0.95
CDKL5O76039 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21■□□□□ 0.95
CDKL5O76039 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDKL5O76039 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDKL5O76039 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDKL5O76039 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CDKL5O76039 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDKL5O76039 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CDKL5O76039 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CDKL5O76039 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDKL5O76039 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDKL5O76039 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL5O76039 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL5O76039 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL5O76039 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL5O76039 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL5O76039 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDKL5O76039 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL5O76039 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.99■□□□□ 0.95
CDKL5O76039 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL5O76039 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
CDKL5O76039 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CDKL5O76039 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL5O76039 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL5O76039 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms