Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN3O60637 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.6■□□□□ 0.57
TSPAN3O60637 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN3O60637 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.6■□□□□ 0.57
TSPAN3O60637 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN3O60637 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TSPAN3O60637 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.6■□□□□ 0.57
TSPAN3O60637 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.6■□□□□ 0.57
TSPAN3O60637 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.6■□□□□ 0.57
TSPAN3O60637 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TSPAN3O60637 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN3O60637 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN3O60637 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
TSPAN3O60637 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN3O60637 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TSPAN3O60637 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TSPAN3O60637 AL138781.2-201ENST00000617896 1843 ntBASIC18.6■□□□□ 0.57
TSPAN3O60637 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN3O60637 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.59■□□□□ 0.57
TSPAN3O60637 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TSPAN3O60637 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
TSPAN3O60637 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TSPAN3O60637 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TSPAN3O60637 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TSPAN3O60637 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
TSPAN3O60637 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TSPAN3O60637 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.59■□□□□ 0.57
TSPAN3O60637 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TSPAN3O60637 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.59■□□□□ 0.57
TSPAN3O60637 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.59■□□□□ 0.57
TSPAN3O60637 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.59■□□□□ 0.57
TSPAN3O60637 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.59■□□□□ 0.57
TSPAN3O60637 MTCL1P1-201ENST00000446207 792 ntBASIC18.59■□□□□ 0.57
TSPAN3O60637 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.59■□□□□ 0.57
TSPAN3O60637 AC091304.2-201ENST00000564639 760 ntBASIC18.59■□□□□ 0.57
TSPAN3O60637 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.59■□□□□ 0.57
TSPAN3O60637 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TSPAN3O60637 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TSPAN3O60637 AC132938.6-201ENST00000623828 1655 ntBASIC18.59■□□□□ 0.57
TSPAN3O60637 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TSPAN3O60637 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.59■□□□□ 0.57
TSPAN3O60637 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TSPAN3O60637 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TSPAN3O60637 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.59■□□□□ 0.57
TSPAN3O60637 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TSPAN3O60637 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TSPAN3O60637 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TSPAN3O60637 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TSPAN3O60637 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TSPAN3O60637 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TSPAN3O60637 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TSPAN3O60637 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
TSPAN3O60637 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.58■□□□□ 0.57
TSPAN3O60637 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TSPAN3O60637 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TSPAN3O60637 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TSPAN3O60637 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TSPAN3O60637 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.58■□□□□ 0.56
TSPAN3O60637 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
TSPAN3O60637 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TSPAN3O60637 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
TSPAN3O60637 NUS1P2-201ENST00000417358 873 ntBASIC18.58■□□□□ 0.56
TSPAN3O60637 TSPY19P-201ENST00000418461 509 ntBASIC18.58■□□□□ 0.56
TSPAN3O60637 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.58■□□□□ 0.56
TSPAN3O60637 TSPY18P-201ENST00000441642 509 ntBASIC18.58■□□□□ 0.56
TSPAN3O60637 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.58■□□□□ 0.56
TSPAN3O60637 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TSPAN3O60637 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.58■□□□□ 0.56
TSPAN3O60637 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TSPAN3O60637 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TSPAN3O60637 AL121772.3-201ENST00000610840 674 ntBASIC18.58■□□□□ 0.56
TSPAN3O60637 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
TSPAN3O60637 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
TSPAN3O60637 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TSPAN3O60637 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TSPAN3O60637 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TSPAN3O60637 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TSPAN3O60637 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN3O60637 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN3O60637 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TSPAN3O60637 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN3O60637 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN3O60637 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.57■□□□□ 0.56
TSPAN3O60637 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.57■□□□□ 0.56
TSPAN3O60637 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN3O60637 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.57■□□□□ 0.56
TSPAN3O60637 KRT18P31-201ENST00000506277 1292 ntBASIC18.57■□□□□ 0.56
TSPAN3O60637 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.57■□□□□ 0.56
TSPAN3O60637 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN3O60637 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TSPAN3O60637 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.57■□□□□ 0.56
TSPAN3O60637 IFNL4P1-201ENST00000607083 540 ntBASIC18.57■□□□□ 0.56
TSPAN3O60637 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN3O60637 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN3O60637 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.57■□□□□ 0.56
TSPAN3O60637 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN3O60637 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN3O60637 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN3O60637 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN3O60637 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms