Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLC28A2O43868 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC28A2O43868 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC28A2O43868 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLC28A2O43868 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC28A2O43868 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.43■□□□□ 0.38
SLC28A2O43868 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.43■□□□□ 0.38
SLC28A2O43868 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
SLC28A2O43868 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC28A2O43868 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SLC28A2O43868 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
SLC28A2O43868 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC28A2O43868 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC28A2O43868 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SLC28A2O43868 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC28A2O43868 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC28A2O43868 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC28A2O43868 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.42■□□□□ 0.38
SLC28A2O43868 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC28A2O43868 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
SLC28A2O43868 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC28A2O43868 RCC2P3-201ENST00000418112 1537 ntBASIC17.42■□□□□ 0.38
SLC28A2O43868 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC28A2O43868 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
SLC28A2O43868 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
SLC28A2O43868 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC28A2O43868 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SLC28A2O43868 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC28A2O43868 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC28A2O43868 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SLC28A2O43868 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC28A2O43868 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC28A2O43868 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC28A2O43868 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.42■□□□□ 0.38
SLC28A2O43868 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC28A2O43868 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC28A2O43868 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC28A2O43868 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC28A2O43868 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SLC28A2O43868 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SLC28A2O43868 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC28A2O43868 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SLC28A2O43868 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC28A2O43868 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC28A2O43868 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
SLC28A2O43868 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC28A2O43868 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC28A2O43868 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SLC28A2O43868 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC28A2O43868 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC28A2O43868 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC28A2O43868 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC28A2O43868 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SLC28A2O43868 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC28A2O43868 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC28A2O43868 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC28A2O43868 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
SLC28A2O43868 MRPL3P1-201ENST00000400109 1033 ntBASIC17.41■□□□□ 0.38
SLC28A2O43868 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC28A2O43868 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
SLC28A2O43868 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC28A2O43868 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC28A2O43868 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC28A2O43868 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC28A2O43868 AP000867.3-201ENST00000524675 377 ntBASIC17.41■□□□□ 0.38
SLC28A2O43868 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.41■□□□□ 0.38
SLC28A2O43868 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC28A2O43868 AF228730.7-201ENST00000641842 219 ntBASIC17.41■□□□□ 0.38
SLC28A2O43868 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC28A2O43868 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC28A2O43868 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC28A2O43868 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC28A2O43868 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC28A2O43868 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC28A2O43868 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC28A2O43868 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC28A2O43868 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC28A2O43868 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC28A2O43868 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC28A2O43868 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC28A2O43868 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC28A2O43868 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC28A2O43868 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC28A2O43868 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC28A2O43868 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms