Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SNAI2O43623 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNAI2O43623 NCF1B-203ENST00000435988 1254 ntBASIC13.55□□□□□ -0.24
SNAI2O43623 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.55□□□□□ -0.24
SNAI2O43623 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNAI2O43623 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.55□□□□□ -0.24
SNAI2O43623 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC13.55□□□□□ -0.24
SNAI2O43623 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SNAI2O43623 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.55□□□□□ -0.24
SNAI2O43623 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNAI2O43623 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SNAI2O43623 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.55□□□□□ -0.24
SNAI2O43623 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNAI2O43623 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.55□□□□□ -0.24
SNAI2O43623 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
SNAI2O43623 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
SNAI2O43623 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.55□□□□□ -0.24
SNAI2O43623 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNAI2O43623 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNAI2O43623 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SNAI2O43623 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.55□□□□□ -0.24
SNAI2O43623 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SNAI2O43623 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNAI2O43623 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SNAI2O43623 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNAI2O43623 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.54□□□□□ -0.24
SNAI2O43623 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SNAI2O43623 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
SNAI2O43623 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SNAI2O43623 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.54□□□□□ -0.24
SNAI2O43623 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SNAI2O43623 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.54□□□□□ -0.24
SNAI2O43623 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SNAI2O43623 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.54□□□□□ -0.24
SNAI2O43623 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.54□□□□□ -0.24
SNAI2O43623 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 PPP1R14BP3-201ENST00000509033 445 ntBASIC13.54□□□□□ -0.24
SNAI2O43623 DLX3-202ENST00000512495 834 ntTSL 2 BASIC13.54□□□□□ -0.24
SNAI2O43623 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.54□□□□□ -0.24
SNAI2O43623 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.54□□□□□ -0.24
SNAI2O43623 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SNAI2O43623 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SNAI2O43623 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
SNAI2O43623 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.54□□□□□ -0.24
SNAI2O43623 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SNAI2O43623 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.54□□□□□ -0.24
SNAI2O43623 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.54□□□□□ -0.24
SNAI2O43623 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.54□□□□□ -0.24
SNAI2O43623 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 AC011676.5-201ENST00000624864 2660 ntBASIC13.54□□□□□ -0.24
SNAI2O43623 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SNAI2O43623 RCC2P3-201ENST00000418112 1537 ntBASIC13.54□□□□□ -0.24
SNAI2O43623 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNAI2O43623 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.53□□□□□ -0.24
SNAI2O43623 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SNAI2O43623 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SNAI2O43623 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.53□□□□□ -0.24
SNAI2O43623 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNAI2O43623 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms