Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CEP290O15078 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CEP290O15078 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.43■□□□□ 0.7
CEP290O15078 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CEP290O15078 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CEP290O15078 AL390754.1-201ENST00000619088 582 ntBASIC19.43■□□□□ 0.7
CEP290O15078 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CEP290O15078 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CEP290O15078 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CEP290O15078 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CEP290O15078 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.43■□□□□ 0.7
CEP290O15078 AC004945.1-201ENST00000416738 983 ntBASIC19.43■□□□□ 0.7
CEP290O15078 FAM58DP-201ENST00000428076 619 ntBASIC19.43■□□□□ 0.7
CEP290O15078 AC069335.1-201ENST00000489972 472 ntBASIC19.43■□□□□ 0.7
CEP290O15078 AC112698.1-201ENST00000510299 916 ntBASIC19.43■□□□□ 0.7
CEP290O15078 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.43■□□□□ 0.7
CEP290O15078 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CEP290O15078 AC004790.2-201ENST00000623588 572 ntBASIC19.43■□□□□ 0.7
CEP290O15078 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CEP290O15078 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CEP290O15078 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CEP290O15078 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CEP290O15078 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CEP290O15078 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CEP290O15078 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CEP290O15078 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.42■□□□□ 0.7
CEP290O15078 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CEP290O15078 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.42■□□□□ 0.7
CEP290O15078 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.42■□□□□ 0.7
CEP290O15078 SLC25A6P5-201ENST00000435663 894 ntBASIC19.42■□□□□ 0.7
CEP290O15078 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CEP290O15078 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CEP290O15078 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.42■□□□□ 0.7
CEP290O15078 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CEP290O15078 AL662799.1-202ENST00000614205 422 ntBASIC19.42■□□□□ 0.7
CEP290O15078 IGHV3-72-202ENST00000621503 303 ntBASIC19.42■□□□□ 0.7
CEP290O15078 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CEP290O15078 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CEP290O15078 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CEP290O15078 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CEP290O15078 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CEP290O15078 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CEP290O15078 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.42■□□□□ 0.7
CEP290O15078 AC007967.3-201ENST00000434308 558 ntBASIC19.42■□□□□ 0.7
CEP290O15078 ACA64.2-201ENST00000459014 129 ntBASIC19.42■□□□□ 0.7
CEP290O15078 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.42■□□□□ 0.7
CEP290O15078 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.42■□□□□ 0.7
CEP290O15078 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.42■□□□□ 0.7
CEP290O15078 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CEP290O15078 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CEP290O15078 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CEP290O15078 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CEP290O15078 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CEP290O15078 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.41■□□□□ 0.7
CEP290O15078 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CEP290O15078 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CEP290O15078 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CEP290O15078 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CEP290O15078 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.41■□□□□ 0.7
CEP290O15078 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.41■□□□□ 0.7
CEP290O15078 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CEP290O15078 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.41■□□□□ 0.7
CEP290O15078 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.41■□□□□ 0.7
CEP290O15078 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.41■□□□□ 0.7
CEP290O15078 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.41■□□□□ 0.7
CEP290O15078 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CEP290O15078 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CEP290O15078 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.41■□□□□ 0.7
CEP290O15078 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CEP290O15078 KRT18P65-201ENST00000439811 1286 ntBASIC19.41■□□□□ 0.7
CEP290O15078 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CEP290O15078 AC008667.4-201ENST00000607370 168 ntBASIC19.41■□□□□ 0.7
CEP290O15078 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CEP290O15078 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.4■□□□□ 0.7
CEP290O15078 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.4■□□□□ 0.7
CEP290O15078 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CEP290O15078 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CEP290O15078 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CEP290O15078 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CEP290O15078 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CEP290O15078 BASP1P1-201ENST00000430708 665 ntBASIC19.4■□□□□ 0.7
CEP290O15078 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.4■□□□□ 0.7
CEP290O15078 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.4■□□□□ 0.7
CEP290O15078 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.4■□□□□ 0.7
CEP290O15078 AL805961.1-202ENST00000641562 540 ntBASIC19.4■□□□□ 0.7
CEP290O15078 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CEP290O15078 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.4■□□□□ 0.7
CEP290O15078 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.4■□□□□ 0.7
CEP290O15078 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CEP290O15078 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CEP290O15078 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CEP290O15078 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CEP290O15078 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CEP290O15078 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CEP290O15078 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CEP290O15078 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.4■□□□□ 0.7
CEP290O15078 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CEP290O15078 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.4■□□□□ 0.7
CEP290O15078 CU639417.3-201ENST00000624240 1404 ntBASIC19.4■□□□□ 0.7
CEP290O15078 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms