Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SOX1O00570 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SOX1O00570 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SOX1O00570 AL512408.1-201ENST00000569378 2000 ntBASIC19.1■□□□□ 0.65
SOX1O00570 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.1■□□□□ 0.65
SOX1O00570 FO538757.1-201ENST00000623083 1397 ntBASIC19.1■□□□□ 0.65
SOX1O00570 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SOX1O00570 TUBB3P1-201ENST00000405796 1332 ntBASIC19.1■□□□□ 0.65
SOX1O00570 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.1■□□□□ 0.65
SOX1O00570 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.1■□□□□ 0.65
SOX1O00570 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SOX1O00570 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SOX1O00570 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.1■□□□□ 0.65
SOX1O00570 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SOX1O00570 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SOX1O00570 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SOX1O00570 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.1■□□□□ 0.65
SOX1O00570 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SOX1O00570 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.1■□□□□ 0.65
SOX1O00570 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SOX1O00570 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.1■□□□□ 0.65
SOX1O00570 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.1■□□□□ 0.65
SOX1O00570 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.1■□□□□ 0.65
SOX1O00570 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.1■□□□□ 0.65
SOX1O00570 OR7E47P-204ENST00000575924 449 ntBASIC19.1■□□□□ 0.65
SOX1O00570 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.1■□□□□ 0.65
SOX1O00570 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.1■□□□□ 0.65
SOX1O00570 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.1■□□□□ 0.65
SOX1O00570 AL353135.1-201ENST00000606729 504 ntBASIC19.1■□□□□ 0.65
SOX1O00570 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SOX1O00570 AL390754.1-201ENST00000619088 582 ntBASIC19.1■□□□□ 0.65
SOX1O00570 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SOX1O00570 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.1■□□□□ 0.65
SOX1O00570 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SOX1O00570 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SOX1O00570 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SOX1O00570 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SOX1O00570 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.09■□□□□ 0.65
SOX1O00570 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SOX1O00570 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SOX1O00570 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SOX1O00570 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.09■□□□□ 0.65
SOX1O00570 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.09■□□□□ 0.65
SOX1O00570 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
SOX1O00570 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SOX1O00570 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.09■□□□□ 0.65
SOX1O00570 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SOX1O00570 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SOX1O00570 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.09■□□□□ 0.65
SOX1O00570 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SOX1O00570 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SOX1O00570 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.09■□□□□ 0.65
SOX1O00570 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SOX1O00570 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.09■□□□□ 0.65
SOX1O00570 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.09■□□□□ 0.65
SOX1O00570 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.09■□□□□ 0.65
SOX1O00570 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.09■□□□□ 0.65
SOX1O00570 AC023141.13-201ENST00000604991 943 ntBASIC19.09■□□□□ 0.65
SOX1O00570 AD001527.2-201ENST00000622994 785 ntBASIC19.09■□□□□ 0.65
SOX1O00570 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SOX1O00570 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SOX1O00570 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SOX1O00570 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SOX1O00570 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SOX1O00570 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SOX1O00570 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SOX1O00570 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SOX1O00570 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.09■□□□□ 0.65
SOX1O00570 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SOX1O00570 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SOX1O00570 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.08■□□□□ 0.65
SOX1O00570 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SOX1O00570 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
SOX1O00570 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.08■□□□□ 0.65
SOX1O00570 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SOX1O00570 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SOX1O00570 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SOX1O00570 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SOX1O00570 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.08■□□□□ 0.64
SOX1O00570 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.08■□□□□ 0.64
SOX1O00570 ADH5P3-201ENST00000433842 1137 ntBASIC19.08■□□□□ 0.64
SOX1O00570 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.08■□□□□ 0.64
SOX1O00570 KLF2P3-201ENST00000451977 1087 ntBASIC19.08■□□□□ 0.64
SOX1O00570 TIMM8BP1-201ENST00000452384 211 ntBASIC19.08■□□□□ 0.64
SOX1O00570 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.08■□□□□ 0.64
SOX1O00570 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.08■□□□□ 0.64
SOX1O00570 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.08■□□□□ 0.64
SOX1O00570 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.08■□□□□ 0.64
SOX1O00570 AC116407.2-201ENST00000613639 860 ntBASIC19.08■□□□□ 0.64
SOX1O00570 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SOX1O00570 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SOX1O00570 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SOX1O00570 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.08■□□□□ 0.64
SOX1O00570 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SOX1O00570 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SOX1O00570 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.08■□□□□ 0.64
SOX1O00570 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SOX1O00570 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SOX1O00570 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SOX1O00570 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms