Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 AC091305.1-201ENST00000479476 895 ntBASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 AC007322.4-201ENST00000509611 723 ntBASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 MAG-206ENST00000597035 542 ntTSL 4 BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC11.46□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 ABR-203ENST00000536794 2213 ntTSL 2 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 COX20-201ENST00000366528 568 ntTSL 2 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 AL136116.3-201ENST00000402907 1138 ntBASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 CYP2T3P-201ENST00000601990 817 ntBASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 MYCNOS-205ENST00000641950 531 ntBASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TMEM256-PLSCR3K7ERE1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms