Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 AL353807.1-201ENST00000427475 662 ntBASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 AF186192.3-201ENST00000583427 947 ntBASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 AC093010.1-201ENST00000473625 1624 ntBASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 AL023806.1-201ENST00000603994 1649 ntBASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 MESTP1-201ENST00000404287 994 ntBASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 C1QBPP2-201ENST00000528754 825 ntBASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 AC073195.1-201ENST00000607241 877 ntBASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 AP000692.2-201ENST00000608391 879 ntBASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV5A0A0B4J249 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 AC124067.4-201ENST00000519691 2379 ntBASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 LINC01126-201ENST00000623515 1646 ntBASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 AL355312.1-201ENST00000407115 2176 ntBASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 CROCCP1-201ENST00000426910 5675 ntBASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 MIR149-201ENST00000384879 89 ntBASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 AC006058.3-201ENST00000606217 1069 ntBASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
TRAV5A0A0B4J249 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms