Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 RCN1P2-201ENST00000398357 915 ntBASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 MTCL1P1-201ENST00000446207 792 ntBASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 FAM197Y8-203ENST00000450145 560 ntBASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 AC132008.2-207ENST00000454517 770 ntBASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 AP001005.1-201ENST00000571755 1248 ntBASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 AL773604.1-201ENST00000617417 272 ntBASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 TP73-AS1-207ENST00000624167 988 ntBASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1G3Q9Y6M4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 RBM17P3-201ENST00000417687 1192 ntBASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1G3Q9Y6M4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 KRT18P67-201ENST00000432816 1264 ntBASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 KRT18P65-201ENST00000439811 1286 ntBASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 AF186996.4-201ENST00000467186 377 ntBASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 AC008608.2-201ENST00000606089 416 ntBASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 AL138831.2-201ENST00000606564 490 ntBASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CSNK1G3Q9Y6M4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms