Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
HS3ST3A1Q9Y663 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HS3ST3A1Q9Y663 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HS3ST3A1Q9Y663 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 AC122714.2-201ENST00000502787 707 ntBASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 IL9RP2-201ENST00000423948 1312 ntBASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HS3ST3A1Q9Y663 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 AL356309.3-201ENST00000624132 1934 ntBASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 AP000867.4-201ENST00000641616 219 ntBASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HS3ST3A1Q9Y663 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HS3ST3A1Q9Y663 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
HS3ST3A1Q9Y663 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HS3ST3A1Q9Y663 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HS3ST3A1Q9Y663 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 BX323043.1-201ENST00000641006 1765 ntBASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 FAM215A-202ENST00000632077 792 ntBASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HS3ST3A1Q9Y663 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HS3ST3A1Q9Y663 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HS3ST3A1Q9Y663 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
HS3ST3A1Q9Y663 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms