Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 AC004967.1-201ENST00000453589 447 ntBASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 AC002310.6-201ENST00000624451 1377 ntBASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 AL353593.2-201ENST00000602529 1483 ntBASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 DNAJB3-202ENST00000449667 1266 ntBASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 PGM5P2-202ENST00000637225 1043 ntBASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 PHGDH-209ENST00000641074 1780 ntBASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 NCF1C-201ENST00000438382 1427 ntBASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 AL139424.1-201ENST00000607572 797 ntBASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCN10AQ9Y5Y9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 SPDYE21P-201ENST00000413323 827 ntBASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 AC103564.2-201ENST00000432853 1299 ntBASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 ALG1L5P-201ENST00000482043 771 ntBASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.68■□□□□ 0.74
SCN10AQ9Y5Y9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.67■□□□□ 0.74
SCN10AQ9Y5Y9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN10AQ9Y5Y9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN10AQ9Y5Y9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCN10AQ9Y5Y9 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.67■□□□□ 0.74
SCN10AQ9Y5Y9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.67■□□□□ 0.74
SCN10AQ9Y5Y9 AC108073.2-201ENST00000464002 357 ntBASIC19.67■□□□□ 0.74
SCN10AQ9Y5Y9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.67■□□□□ 0.74
SCN10AQ9Y5Y9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN10AQ9Y5Y9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN10AQ9Y5Y9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
SCN10AQ9Y5Y9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN10AQ9Y5Y9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN10AQ9Y5Y9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms