Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC100803.2-201ENST00000562459 1963 ntBASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 TSPY15P-201ENST00000457163 923 ntBASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 TMEM191A-211ENST00000637163 1067 ntBASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 AP006294.2-201ENST00000641667 209 ntBASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 AC009053.2-201ENST00000563701 2365 ntBASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHA3Q9Y5H8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHA3Q9Y5H8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.89■□□□□ 0.62
PCDHA3Q9Y5H8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHA3Q9Y5H8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
PCDHA3Q9Y5H8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 AC080080.1-201ENST00000625121 2420 ntBASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 MIR3917-201ENST00000580971 93 ntBASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 AC141586.5-201ENST00000624546 2050 ntBASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHA3Q9Y5H8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 AL355312.1-201ENST00000407115 2176 ntBASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 AL512604.3-201ENST00000569583 964 ntBASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 NEK4P2-201ENST00000580004 1012 ntBASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHA3Q9Y5H8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PCDHA3Q9Y5H8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms