Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COPS3Q9UNS2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COPS3Q9UNS2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COPS3Q9UNS2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
COPS3Q9UNS2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COPS3Q9UNS2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
COPS3Q9UNS2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COPS3Q9UNS2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COPS3Q9UNS2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.15■□□□□ 0.18
COPS3Q9UNS2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.15■□□□□ 0.18
COPS3Q9UNS2 ITM2C-210ENST00000620962 501 ntBASIC16.15■□□□□ 0.18
COPS3Q9UNS2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COPS3Q9UNS2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COPS3Q9UNS2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COPS3Q9UNS2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COPS3Q9UNS2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.15■□□□□ 0.18
COPS3Q9UNS2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COPS3Q9UNS2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
COPS3Q9UNS2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.18
COPS3Q9UNS2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 HOXB1-202ENST00000577092 1414 ntBASIC16.14■□□□□ 0.17
COPS3Q9UNS2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 PRORSD1P-201ENST00000295112 541 ntBASIC16.14■□□□□ 0.17
COPS3Q9UNS2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 KRT18P23-201ENST00000435622 1283 ntBASIC16.14■□□□□ 0.17
COPS3Q9UNS2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 AC046158.3-201ENST00000624947 2558 ntBASIC16.14■□□□□ 0.17
COPS3Q9UNS2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
COPS3Q9UNS2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 ABHD17AP1-201ENST00000358206 933 ntBASIC16.13■□□□□ 0.17
COPS3Q9UNS2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 KRT18P29-201ENST00000397031 1267 ntBASIC16.13■□□□□ 0.17
COPS3Q9UNS2 RPS2P55-201ENST00000397318 883 ntBASIC16.13■□□□□ 0.17
COPS3Q9UNS2 FAM201B-201ENST00000458407 597 ntBASIC16.13■□□□□ 0.17
COPS3Q9UNS2 AC107956.1-201ENST00000494359 873 ntBASIC16.13■□□□□ 0.17
COPS3Q9UNS2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 KRT18P55-202ENST00000578578 1546 ntBASIC16.13■□□□□ 0.17
COPS3Q9UNS2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 AC108860.2-201ENST00000562760 2183 ntBASIC16.13■□□□□ 0.17
COPS3Q9UNS2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COPS3Q9UNS2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
COPS3Q9UNS2 TSPY20P-201ENST00000450910 630 ntBASIC16.12■□□□□ 0.17
COPS3Q9UNS2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms