Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 AC068472.1-201ENST00000474589 881 ntBASIC17.9■□□□□ 0.46
NCDNQ9UBB6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 AL138831.2-201ENST00000606564 490 ntBASIC17.9■□□□□ 0.46
NCDNQ9UBB6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NCDNQ9UBB6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
NCDNQ9UBB6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NCDNQ9UBB6 AC087289.5-201ENST00000586076 3175 ntBASIC17.89■□□□□ 0.46
NCDNQ9UBB6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 AC108751.1-201ENST00000490852 363 ntBASIC17.89■□□□□ 0.45
NCDNQ9UBB6 AC113404.2-201ENST00000507884 177 ntBASIC17.89■□□□□ 0.45
NCDNQ9UBB6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 PGM5P2-202ENST00000637225 1043 ntBASIC17.89■□□□□ 0.45
NCDNQ9UBB6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCDNQ9UBB6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCDNQ9UBB6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NCDNQ9UBB6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NCDNQ9UBB6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.87■□□□□ 0.45
NCDNQ9UBB6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCDNQ9UBB6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NCDNQ9UBB6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCDNQ9UBB6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.87■□□□□ 0.45
NCDNQ9UBB6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCDNQ9UBB6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCDNQ9UBB6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.87■□□□□ 0.45
NCDNQ9UBB6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.87■□□□□ 0.45
NCDNQ9UBB6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCDNQ9UBB6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCDNQ9UBB6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCDNQ9UBB6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.87■□□□□ 0.45
NCDNQ9UBB6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCDNQ9UBB6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.87■□□□□ 0.45
NCDNQ9UBB6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 225.1 ms