Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL20A1Q9P218 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.4■□□□□ 0.86
COL20A1Q9P218 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.4■□□□□ 0.86
COL20A1Q9P218 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
COL20A1Q9P218 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL20A1Q9P218 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
COL20A1Q9P218 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.39■□□□□ 0.86
COL20A1Q9P218 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL20A1Q9P218 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.86
COL20A1Q9P218 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
COL20A1Q9P218 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL20A1Q9P218 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
COL20A1Q9P218 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL20A1Q9P218 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL20A1Q9P218 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL20A1Q9P218 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL20A1Q9P218 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL20A1Q9P218 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL20A1Q9P218 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.39■□□□□ 0.85
COL20A1Q9P218 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL20A1Q9P218 AC007967.3-201ENST00000434308 558 ntBASIC20.39■□□□□ 0.85
COL20A1Q9P218 FAM197Y8-203ENST00000450145 560 ntBASIC20.39■□□□□ 0.85
COL20A1Q9P218 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.39■□□□□ 0.85
COL20A1Q9P218 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.39■□□□□ 0.85
COL20A1Q9P218 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.39■□□□□ 0.85
COL20A1Q9P218 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL20A1Q9P218 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL20A1Q9P218 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL20A1Q9P218 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL20A1Q9P218 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL20A1Q9P218 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL20A1Q9P218 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.39■□□□□ 0.85
COL20A1Q9P218 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
COL20A1Q9P218 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL20A1Q9P218 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
COL20A1Q9P218 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL20A1Q9P218 AC010460.3-201ENST00000511359 1579 ntBASIC20.38■□□□□ 0.85
COL20A1Q9P218 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
COL20A1Q9P218 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL20A1Q9P218 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.38■□□□□ 0.85
COL20A1Q9P218 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL20A1Q9P218 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL20A1Q9P218 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL20A1Q9P218 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL20A1Q9P218 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.38■□□□□ 0.85
COL20A1Q9P218 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.38■□□□□ 0.85
COL20A1Q9P218 DUTP2-201ENST00000519164 463 ntBASIC20.38■□□□□ 0.85
COL20A1Q9P218 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
COL20A1Q9P218 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL20A1Q9P218 AL662844.1-201ENST00000546340 181 ntBASIC20.38■□□□□ 0.85
COL20A1Q9P218 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.38■□□□□ 0.85
COL20A1Q9P218 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.38■□□□□ 0.85
COL20A1Q9P218 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
COL20A1Q9P218 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.38■□□□□ 0.85
COL20A1Q9P218 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL20A1Q9P218 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.38■□□□□ 0.85
COL20A1Q9P218 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.38■□□□□ 0.85
COL20A1Q9P218 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL20A1Q9P218 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
COL20A1Q9P218 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL20A1Q9P218 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL20A1Q9P218 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
COL20A1Q9P218 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.37■□□□□ 0.85
COL20A1Q9P218 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.37■□□□□ 0.85
COL20A1Q9P218 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.37■□□□□ 0.85
COL20A1Q9P218 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL20A1Q9P218 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL20A1Q9P218 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.37■□□□□ 0.85
COL20A1Q9P218 AC079776.4-201ENST00000511039 504 ntBASIC20.37■□□□□ 0.85
COL20A1Q9P218 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.37■□□□□ 0.85
COL20A1Q9P218 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.37■□□□□ 0.85
COL20A1Q9P218 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL20A1Q9P218 MTDHP3-201ENST00000594186 672 ntBASIC20.37■□□□□ 0.85
COL20A1Q9P218 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
COL20A1Q9P218 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.37■□□□□ 0.85
COL20A1Q9P218 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL20A1Q9P218 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL20A1Q9P218 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL20A1Q9P218 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL20A1Q9P218 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL20A1Q9P218 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL20A1Q9P218 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL20A1Q9P218 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL20A1Q9P218 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.37■□□□□ 0.85
COL20A1Q9P218 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL20A1Q9P218 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL20A1Q9P218 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL20A1Q9P218 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL20A1Q9P218 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL20A1Q9P218 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
COL20A1Q9P218 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.36■□□□□ 0.85
COL20A1Q9P218 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL20A1Q9P218 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL20A1Q9P218 AC104581.1-202ENST00000635932 2618 ntBASIC20.36■□□□□ 0.85
COL20A1Q9P218 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL20A1Q9P218 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL20A1Q9P218 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.36■□□□□ 0.85
COL20A1Q9P218 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL20A1Q9P218 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
COL20A1Q9P218 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms