Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CXXC1Q9P0U4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CXXC1Q9P0U4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CXXC1Q9P0U4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
CXXC1Q9P0U4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 AC006504.4-201ENST00000592118 1568 ntBASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 SPDYE21P-201ENST00000413323 827 ntBASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 ELK2BP-201ENST00000415014 1224 ntBASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 VN2R19P-201ENST00000442399 1052 ntBASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 HCG4B-203ENST00000450128 991 ntBASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 AC093028.1-201ENST00000622998 982 ntBASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CXXC1Q9P0U4 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 AL049812.1-201ENST00000432563 2267 ntBASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 AC108073.2-201ENST00000464002 357 ntBASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 AL031432.2-201ENST00000566714 459 ntBASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 AL928711.1-201ENST00000570165 459 ntBASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 MIR4751-201ENST00000578027 74 ntBASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 AC007952.6-201ENST00000573168 2673 ntBASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 AC003957.1-201ENST00000625108 2673 ntBASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 SIGLEC16-201ENST00000599858 1437 ntBASIC19.31■□□□□ 0.68
CXXC1Q9P0U4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 AC004706.3-202ENST00000621574 984 ntBASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CXXC1Q9P0U4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 AC010460.3-201ENST00000511359 1579 ntBASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 AL589182.2-201ENST00000619332 1049 ntBASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CXXC1Q9P0U4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms