Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 CRYGFP-201ENST00000418459 633 ntBASIC17.86■□□□□ 0.45
MKS1Q9NXB0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 AL353719.1-201ENST00000566847 864 ntBASIC17.86■□□□□ 0.45
MKS1Q9NXB0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.86■□□□□ 0.45
MKS1Q9NXB0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 LINC00167-201ENST00000530583 1419 ntBASIC17.85■□□□□ 0.45
MKS1Q9NXB0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.85■□□□□ 0.45
MKS1Q9NXB0 AC010240.3-201ENST00000607688 395 ntBASIC17.85■□□□□ 0.45
MKS1Q9NXB0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 AC092666.2-201ENST00000613287 246 ntBASIC17.85■□□□□ 0.45
MKS1Q9NXB0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 LINC01451-201ENST00000623792 534 ntBASIC17.85■□□□□ 0.45
MKS1Q9NXB0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MKS1Q9NXB0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 TSPY17P-201ENST00000450329 467 ntBASIC17.84■□□□□ 0.45
MKS1Q9NXB0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 AC008687.5-201ENST00000593746 558 ntBASIC17.84■□□□□ 0.45
MKS1Q9NXB0 REXO1L10P-201ENST00000615707 1290 ntBASIC17.84■□□□□ 0.45
MKS1Q9NXB0 REXO1L12P-201ENST00000622156 912 ntBASIC17.84■□□□□ 0.45
MKS1Q9NXB0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms