Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 PCDHA14-201ENST00000506751 2298 ntBASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 AC004951.3-201ENST00000418645 1148 ntBASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 AP002982.1-201ENST00000492365 877 ntBASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 RN7SL471P-201ENST00000580476 299 ntBASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 HTR7P1-201ENST00000538670 1336 ntBASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 AL355312.1-201ENST00000407115 2176 ntBASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 FLJ38576-201ENST00000623820 2459 ntBASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC3Q9NUV7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
SPTLC3Q9NUV7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 AC099343.3-201ENST00000605834 2503 ntBASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 KSR1P1-201ENST00000446298 240 ntBASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 CKBP1-201ENST00000565489 1086 ntBASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 AL353708.3-201ENST00000610272 989 ntBASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 AC011298.2-201ENST00000617989 482 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms