Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 AC007663.1-201ENST00000438948 1240 ntBASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 AC098590.1-201ENST00000468126 897 ntBASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 SEC1P-202ENST00000473944 940 ntBASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 AC026471.5-201ENST00000615068 467 ntBASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SLC52A3Q9NQ40 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC52A3Q9NQ40 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 AL355355.2-201ENST00000442321 338 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms