Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 IER3-202ENST00000376377 1350 ntBASIC19.08■□□□□ 0.65
LHX5Q9H2C1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
LHX5Q9H2C1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LHX5Q9H2C1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.08■□□□□ 0.65
LHX5Q9H2C1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LHX5Q9H2C1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
LHX5Q9H2C1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
LHX5Q9H2C1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
LHX5Q9H2C1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.08■□□□□ 0.64
LHX5Q9H2C1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.08■□□□□ 0.64
LHX5Q9H2C1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.08■□□□□ 0.64
LHX5Q9H2C1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.08■□□□□ 0.64
LHX5Q9H2C1 RNF126P1-202ENST00000569893 925 ntBASIC19.08■□□□□ 0.64
LHX5Q9H2C1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.08■□□□□ 0.64
LHX5Q9H2C1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
LHX5Q9H2C1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.08■□□□□ 0.64
LHX5Q9H2C1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
LHX5Q9H2C1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.08■□□□□ 0.64
LHX5Q9H2C1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.08■□□□□ 0.64
LHX5Q9H2C1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LHX5Q9H2C1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
LHX5Q9H2C1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.08■□□□□ 0.64
LHX5Q9H2C1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LHX5Q9H2C1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
LHX5Q9H2C1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LHX5Q9H2C1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LHX5Q9H2C1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.08■□□□□ 0.64
LHX5Q9H2C1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 AC068880.1-201ENST00000507289 2297 ntBASIC19.07■□□□□ 0.64
LHX5Q9H2C1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.07■□□□□ 0.64
LHX5Q9H2C1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LHX5Q9H2C1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LHX5Q9H2C1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LHX5Q9H2C1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LHX5Q9H2C1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.06■□□□□ 0.64
LHX5Q9H2C1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LHX5Q9H2C1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.06■□□□□ 0.64
LHX5Q9H2C1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.06■□□□□ 0.64
LHX5Q9H2C1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.06■□□□□ 0.64
LHX5Q9H2C1 AL645929.1-201ENST00000420084 975 ntBASIC19.06■□□□□ 0.64
LHX5Q9H2C1 TSPY12P-201ENST00000421279 868 ntBASIC19.06■□□□□ 0.64
LHX5Q9H2C1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.06■□□□□ 0.64
LHX5Q9H2C1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.06■□□□□ 0.64
LHX5Q9H2C1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LHX5Q9H2C1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.06■□□□□ 0.64
LHX5Q9H2C1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LHX5Q9H2C1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.06■□□□□ 0.64
LHX5Q9H2C1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LHX5Q9H2C1 AC020763.4-201ENST00000623414 4170 ntBASIC19.06■□□□□ 0.64
LHX5Q9H2C1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LHX5Q9H2C1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
LHX5Q9H2C1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 Z83836.1-201ENST00000624605 1642 ntBASIC19.05■□□□□ 0.64
LHX5Q9H2C1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LHX5Q9H2C1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LHX5Q9H2C1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms