Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC005332.7-201ENST00000614046 2005 ntBASIC22.68■■□□□ 1.22
CNTNAP4Q9C0A0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CNTNAP4Q9C0A0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CNTNAP4Q9C0A0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CNTNAP4Q9C0A0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CNTNAP4Q9C0A0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 AC254562.1-201ENST00000417586 456 ntBASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 AC103564.2-201ENST00000432853 1299 ntBASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 CYMP-203ENST00000474680 1263 ntBASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 AC092865.6-201ENST00000642101 219 ntBASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CNTNAP4Q9C0A0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNTNAP4Q9C0A0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNTNAP4Q9C0A0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CNTNAP4Q9C0A0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
CNTNAP4Q9C0A0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC22.66■■□□□ 1.22
CNTNAP4Q9C0A0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC22.66■■□□□ 1.22
CNTNAP4Q9C0A0 AC108073.2-201ENST00000464002 357 ntBASIC22.66■■□□□ 1.22
CNTNAP4Q9C0A0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC22.66■■□□□ 1.22
CNTNAP4Q9C0A0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC22.66■■□□□ 1.22
CNTNAP4Q9C0A0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC22.66■■□□□ 1.22
CNTNAP4Q9C0A0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNTNAP4Q9C0A0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNTNAP4Q9C0A0 AL353593.2-201ENST00000602529 1483 ntBASIC22.66■■□□□ 1.22
CNTNAP4Q9C0A0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.66■■□□□ 1.22
CNTNAP4Q9C0A0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.66■■□□□ 1.22
CNTNAP4Q9C0A0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNTNAP4Q9C0A0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC22.66■■□□□ 1.22
CNTNAP4Q9C0A0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 AC006504.4-201ENST00000592118 1568 ntBASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 HCG4B-203ENST00000450128 991 ntBASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 C20orf181-201ENST00000623918 480 ntBASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 ANO7L1-203ENST00000602586 1720 ntBASIC22.65■■□□□ 1.22
CNTNAP4Q9C0A0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CNTNAP4Q9C0A0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CNTNAP4Q9C0A0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.64■■□□□ 1.22
CNTNAP4Q9C0A0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CNTNAP4Q9C0A0 COX5BP2-201ENST00000392354 334 ntBASIC22.64■■□□□ 1.22
CNTNAP4Q9C0A0 CRYGEP-201ENST00000412192 528 ntBASIC22.64■■□□□ 1.22
CNTNAP4Q9C0A0 AL020989.1-201ENST00000422979 469 ntBASIC22.64■■□□□ 1.22
CNTNAP4Q9C0A0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC22.64■■□□□ 1.22
CNTNAP4Q9C0A0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC22.64■■□□□ 1.22
CNTNAP4Q9C0A0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC22.64■■□□□ 1.22
CNTNAP4Q9C0A0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CNTNAP4Q9C0A0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.22
CNTNAP4Q9C0A0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
CNTNAP4Q9C0A0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC22.64■■□□□ 1.21
CNTNAP4Q9C0A0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.64■■□□□ 1.21
CNTNAP4Q9C0A0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC22.64■■□□□ 1.21
CNTNAP4Q9C0A0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CNTNAP4Q9C0A0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CNTNAP4Q9C0A0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CNTNAP4Q9C0A0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CNTNAP4Q9C0A0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
CNTNAP4Q9C0A0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC22.64■■□□□ 1.21
CNTNAP4Q9C0A0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CNTNAP4Q9C0A0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.63■■□□□ 1.21
CNTNAP4Q9C0A0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms