Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 AL355802.2-201ENST00000402069 882 ntBASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 AL353807.1-201ENST00000427475 662 ntBASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 APTR-205ENST00000447009 902 ntTSL 2 BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 DUTP2-201ENST00000519164 463 ntBASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 FSCN1P1-201ENST00000568912 1481 ntBASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 HOXB1-202ENST00000577092 1414 ntBASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 AC073648.6-201ENST00000641589 218 ntBASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP3-1Q9BYR8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 UBALD1-205ENST00000590891 2641 ntBASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 LINC00304-203ENST00000565008 1864 ntBASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP3-1Q9BYR8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms