Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 AC122714.2-201ENST00000502787 707 ntBASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 PGM5P2-202ENST00000637225 1043 ntBASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 SIGLEC16-201ENST00000599858 1437 ntBASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
RTFDC1Q9BY42 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 SLC25A24-204ENST00000569674 2357 ntBASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.87■■□□□ 1.09
RTFDC1Q9BY42 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 AC132938.6-201ENST00000623828 1655 ntBASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 AC023274.1-201ENST00000418278 595 ntBASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 AP006288.1-201ENST00000446065 395 ntBASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 AC006557.2-201ENST00000592985 1240 ntBASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.86■■□□□ 1.09
RTFDC1Q9BY42 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTFDC1Q9BY42 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RTFDC1Q9BY42 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RTFDC1Q9BY42 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RTFDC1Q9BY42 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.85■■□□□ 1.09
RTFDC1Q9BY42 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RTFDC1Q9BY42 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.85■■□□□ 1.09
RTFDC1Q9BY42 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.85■■□□□ 1.09
RTFDC1Q9BY42 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC21.85■■□□□ 1.09
RTFDC1Q9BY42 DNAJB3-202ENST00000449667 1266 ntBASIC21.85■■□□□ 1.09
RTFDC1Q9BY42 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC21.85■■□□□ 1.09
RTFDC1Q9BY42 AC064836.3-201ENST00000607928 673 ntBASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms