Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 MIR663A-201ENST00000385250 93 ntBASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 AC097658.1-201ENST00000475555 843 ntBASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 AL121832.2-201ENST00000610979 668 ntBASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 AC008741.2-201ENST00000612792 3115 ntBASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 AC083906.2-201ENST00000511578 360 ntBASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 C1QL1P1-201ENST00000568105 661 ntBASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 AC008687.6-201ENST00000596318 630 ntBASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.68□□□□□ -0.22
SSBP4Q9BWG4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 LINC00602-201ENST00000629776 2065 ntBASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SSBP4Q9BWG4 CROCCP5-201ENST00000436658 830 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms