Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40CQ96S21 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40CQ96S21 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40CQ96S21 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40CQ96S21 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40CQ96S21 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40CQ96S21 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.69□□□□□ -0.06
RAB40CQ96S21 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40CQ96S21 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40CQ96S21 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.69□□□□□ -0.06
RAB40CQ96S21 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40CQ96S21 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.69□□□□□ -0.06
RAB40CQ96S21 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.69□□□□□ -0.06
RAB40CQ96S21 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40CQ96S21 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40CQ96S21 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RAB40CQ96S21 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40CQ96S21 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40CQ96S21 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40CQ96S21 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40CQ96S21 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RAB40CQ96S21 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40CQ96S21 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40CQ96S21 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40CQ96S21 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40CQ96S21 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RAB40CQ96S21 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RAB40CQ96S21 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB40CQ96S21 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB40CQ96S21 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RAB40CQ96S21 AC004951.3-201ENST00000418645 1148 ntBASIC14.68□□□□□ -0.06
RAB40CQ96S21 AC004980.1-204ENST00000429707 299 ntBASIC14.68□□□□□ -0.06
RAB40CQ96S21 KRT16P5-201ENST00000455284 522 ntBASIC14.68□□□□□ -0.06
RAB40CQ96S21 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB40CQ96S21 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
RAB40CQ96S21 AC091390.4-202ENST00000476426 537 ntBASIC14.68□□□□□ -0.06
RAB40CQ96S21 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.68□□□□□ -0.06
RAB40CQ96S21 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.68□□□□□ -0.06
RAB40CQ96S21 CKBP1-201ENST00000565489 1086 ntBASIC14.68□□□□□ -0.06
RAB40CQ96S21 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB40CQ96S21 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 AC022211.2-201ENST00000585075 2527 ntBASIC14.68□□□□□ -0.06
RAB40CQ96S21 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB40CQ96S21 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RAB40CQ96S21 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RAB40CQ96S21 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
RAB40CQ96S21 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40CQ96S21 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40CQ96S21 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40CQ96S21 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40CQ96S21 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40CQ96S21 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40CQ96S21 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40CQ96S21 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40CQ96S21 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40CQ96S21 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40CQ96S21 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40CQ96S21 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40CQ96S21 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 AC009102.3-201ENST00000623118 1491 ntBASIC14.67□□□□□ -0.06
RAB40CQ96S21 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40CQ96S21 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms