Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.63■□□□□ 0.57
RPRD1AQ96P16 AC132938.6-201ENST00000623828 1655 ntBASIC18.63■□□□□ 0.57
RPRD1AQ96P16 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.63■□□□□ 0.57
RPRD1AQ96P16 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPRD1AQ96P16 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 RN7SL606P-201ENST00000472779 293 ntBASIC18.62■□□□□ 0.57
RPRD1AQ96P16 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 MIR3180-1-201ENST00000580374 94 ntBASIC18.62■□□□□ 0.57
RPRD1AQ96P16 MIR3180-3-201ENST00000584616 94 ntBASIC18.62■□□□□ 0.57
RPRD1AQ96P16 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 AC009154.2-201ENST00000621177 724 ntBASIC18.62■□□□□ 0.57
RPRD1AQ96P16 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.62■□□□□ 0.57
RPRD1AQ96P16 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RPRD1AQ96P16 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 DRAXINP1-201ENST00000437611 948 ntBASIC18.61■□□□□ 0.57
RPRD1AQ96P16 KRT18P65-201ENST00000439811 1286 ntBASIC18.61■□□□□ 0.57
RPRD1AQ96P16 LINC00265-3P-201ENST00000447588 903 ntBASIC18.61■□□□□ 0.57
RPRD1AQ96P16 TPSP2-201ENST00000561760 610 ntBASIC18.61■□□□□ 0.57
RPRD1AQ96P16 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPRD1AQ96P16 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 TOB2P1-201ENST00000469761 992 ntBASIC18.6■□□□□ 0.57
RPRD1AQ96P16 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPRD1AQ96P16 REXO1L9P-201ENST00000604264 2108 ntBASIC18.59■□□□□ 0.57
RPRD1AQ96P16 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms