Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CHAMP1Q96JM3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHAMP1Q96JM3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.98■□□□□ 0.95
CHAMP1Q96JM3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHAMP1Q96JM3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHAMP1Q96JM3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHAMP1Q96JM3 AC211429.1-201ENST00000415277 523 ntBASIC20.98■□□□□ 0.95
CHAMP1Q96JM3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHAMP1Q96JM3 KRT18P23-201ENST00000435622 1283 ntBASIC20.98■□□□□ 0.95
CHAMP1Q96JM3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.98■□□□□ 0.95
CHAMP1Q96JM3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.98■□□□□ 0.95
CHAMP1Q96JM3 CR769767.2-201ENST00000622735 460 ntBASIC20.98■□□□□ 0.95
CHAMP1Q96JM3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CHAMP1Q96JM3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.98■□□□□ 0.95
CHAMP1Q96JM3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CHAMP1Q96JM3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHAMP1Q96JM3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHAMP1Q96JM3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHAMP1Q96JM3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHAMP1Q96JM3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 AP003041.3-201ENST00000527151 707 ntBASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHAMP1Q96JM3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.96■□□□□ 0.95
CHAMP1Q96JM3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.96■□□□□ 0.95
CHAMP1Q96JM3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHAMP1Q96JM3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHAMP1Q96JM3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHAMP1Q96JM3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CHAMP1Q96JM3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.96■□□□□ 0.95
CHAMP1Q96JM3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.96■□□□□ 0.95
CHAMP1Q96JM3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.96■□□□□ 0.95
CHAMP1Q96JM3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.96■□□□□ 0.95
CHAMP1Q96JM3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.96■□□□□ 0.95
CHAMP1Q96JM3 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.96■□□□□ 0.95
CHAMP1Q96JM3 AC008550.1-201ENST00000511500 884 ntBASIC20.96■□□□□ 0.95
CHAMP1Q96JM3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.96■□□□□ 0.95
CHAMP1Q96JM3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.96■□□□□ 0.95
CHAMP1Q96JM3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.96■□□□□ 0.95
CHAMP1Q96JM3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHAMP1Q96JM3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CHAMP1Q96JM3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CHAMP1Q96JM3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CHAMP1Q96JM3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.95■□□□□ 0.95
CHAMP1Q96JM3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CHAMP1Q96JM3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
CHAMP1Q96JM3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHAMP1Q96JM3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHAMP1Q96JM3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHAMP1Q96JM3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CHAMP1Q96JM3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CHAMP1Q96JM3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CHAMP1Q96JM3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.95■□□□□ 0.94
CHAMP1Q96JM3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.95■□□□□ 0.94
CHAMP1Q96JM3 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.95■□□□□ 0.94
CHAMP1Q96JM3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CHAMP1Q96JM3 AL023803.3-201ENST00000615559 522 ntBASIC20.95■□□□□ 0.94
CHAMP1Q96JM3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.95■□□□□ 0.94
CHAMP1Q96JM3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHAMP1Q96JM3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHAMP1Q96JM3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.95■□□□□ 0.94
CHAMP1Q96JM3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHAMP1Q96JM3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHAMP1Q96JM3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.94■□□□□ 0.94
CHAMP1Q96JM3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHAMP1Q96JM3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHAMP1Q96JM3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHAMP1Q96JM3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHAMP1Q96JM3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHAMP1Q96JM3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms