Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AL162727.3-201ENST00000635661 2787 ntBASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 AL138688.1-201ENST00000624851 1594 ntBASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 HTR7P1-201ENST00000538670 1336 ntBASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 AC008687.6-201ENST00000596318 630 ntBASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 AL355312.1-201ENST00000407115 2176 ntBASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP6Q96FZ7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 CROCCP2-202ENST00000412962 2773 ntBASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 KRT18P41-201ENST00000518924 1277 ntBASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 AC120498.8-201ENST00000614275 531 ntBASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CHMP6Q96FZ7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 HLA-A-209ENST00000638375 975 ntBASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms