Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA4DQ92854 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA4DQ92854 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA4DQ92854 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA4DQ92854 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.45■□□□□ 0.7
SEMA4DQ92854 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.45■□□□□ 0.7
SEMA4DQ92854 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA4DQ92854 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.45■□□□□ 0.7
SEMA4DQ92854 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
SEMA4DQ92854 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA4DQ92854 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA4DQ92854 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.45■□□□□ 0.7
SEMA4DQ92854 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA4DQ92854 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.45■□□□□ 0.7
SEMA4DQ92854 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA4DQ92854 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA4DQ92854 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.45■□□□□ 0.7
SEMA4DQ92854 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA4DQ92854 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.45■□□□□ 0.7
SEMA4DQ92854 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.45■□□□□ 0.7
SEMA4DQ92854 AL390719.2-201ENST00000606993 987 ntBASIC19.45■□□□□ 0.7
SEMA4DQ92854 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.45■□□□□ 0.7
SEMA4DQ92854 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.45■□□□□ 0.7
SEMA4DQ92854 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA4DQ92854 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.45■□□□□ 0.7
SEMA4DQ92854 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SEMA4DQ92854 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA4DQ92854 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SEMA4DQ92854 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEMA4DQ92854 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEMA4DQ92854 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SEMA4DQ92854 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SEMA4DQ92854 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEMA4DQ92854 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEMA4DQ92854 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SEMA4DQ92854 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SEMA4DQ92854 AC005332.8-201ENST00000622750 2735 ntBASIC19.44■□□□□ 0.7
SEMA4DQ92854 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEMA4DQ92854 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.44■□□□□ 0.7
SEMA4DQ92854 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SEMA4DQ92854 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.44■□□□□ 0.7
SEMA4DQ92854 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.44■□□□□ 0.7
SEMA4DQ92854 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.44■□□□□ 0.7
SEMA4DQ92854 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.44■□□□□ 0.7
SEMA4DQ92854 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.44■□□□□ 0.7
SEMA4DQ92854 AL136038.3-201ENST00000561909 1096 ntBASIC19.44■□□□□ 0.7
SEMA4DQ92854 GPR32P1-201ENST00000601788 811 ntBASIC19.44■□□□□ 0.7
SEMA4DQ92854 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
SEMA4DQ92854 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
SEMA4DQ92854 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEMA4DQ92854 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
SEMA4DQ92854 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.44■□□□□ 0.7
SEMA4DQ92854 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEMA4DQ92854 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
SEMA4DQ92854 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.44■□□□□ 0.7
SEMA4DQ92854 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEMA4DQ92854 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.44■□□□□ 0.7
SEMA4DQ92854 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEMA4DQ92854 AL353692.3-201ENST00000407031 1396 ntBASIC19.44■□□□□ 0.7
SEMA4DQ92854 Z83836.1-201ENST00000624605 1642 ntBASIC19.43■□□□□ 0.7
SEMA4DQ92854 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.43■□□□□ 0.7
SEMA4DQ92854 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4DQ92854 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4DQ92854 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SEMA4DQ92854 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4DQ92854 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4DQ92854 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4DQ92854 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SEMA4DQ92854 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.43■□□□□ 0.7
SEMA4DQ92854 KRT18P55-202ENST00000578578 1546 ntBASIC19.43■□□□□ 0.7
SEMA4DQ92854 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4DQ92854 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.43■□□□□ 0.7
SEMA4DQ92854 AL645929.1-201ENST00000420084 975 ntBASIC19.43■□□□□ 0.7
SEMA4DQ92854 FAM86EP-206ENST00000510506 987 ntBASIC19.43■□□□□ 0.7
SEMA4DQ92854 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.43■□□□□ 0.7
SEMA4DQ92854 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.43■□□□□ 0.7
SEMA4DQ92854 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SEMA4DQ92854 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
SEMA4DQ92854 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4DQ92854 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.43■□□□□ 0.7
SEMA4DQ92854 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.43■□□□□ 0.7
SEMA4DQ92854 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4DQ92854 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4DQ92854 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4DQ92854 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4DQ92854 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4DQ92854 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4DQ92854 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SEMA4DQ92854 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SEMA4DQ92854 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.42■□□□□ 0.7
SEMA4DQ92854 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4DQ92854 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4DQ92854 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4DQ92854 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4DQ92854 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4DQ92854 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4DQ92854 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4DQ92854 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
SEMA4DQ92854 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SEMA4DQ92854 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms