Protein–RNA interactions for Protein: Q92538

GBF1, Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, humanhuman

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1Q92538 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.27■□□□□ 0.68
GBF1Q92538 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
GBF1Q92538 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
GBF1Q92538 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GBF1Q92538 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GBF1Q92538 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
GBF1Q92538 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GBF1Q92538 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.26■□□□□ 0.67
GBF1Q92538 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GBF1Q92538 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GBF1Q92538 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.26■□□□□ 0.67
GBF1Q92538 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.26■□□□□ 0.67
GBF1Q92538 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GBF1Q92538 HCG4B-203ENST00000450128 991 ntBASIC19.26■□□□□ 0.67
GBF1Q92538 SNHG9-202ENST00000564014 471 ntBASIC19.26■□□□□ 0.67
GBF1Q92538 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
GBF1Q92538 NCF1C-201ENST00000438382 1427 ntBASIC19.26■□□□□ 0.67
GBF1Q92538 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.26■□□□□ 0.67
GBF1Q92538 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.26■□□□□ 0.67
GBF1Q92538 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GBF1Q92538 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GBF1Q92538 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GBF1Q92538 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
GBF1Q92538 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GBF1Q92538 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GBF1Q92538 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.26■□□□□ 0.67
GBF1Q92538 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.26■□□□□ 0.67
GBF1Q92538 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
GBF1Q92538 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GBF1Q92538 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.26■□□□□ 0.67
GBF1Q92538 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.26■□□□□ 0.67
GBF1Q92538 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.26■□□□□ 0.67
GBF1Q92538 AC093028.1-201ENST00000622998 982 ntBASIC19.26■□□□□ 0.67
GBF1Q92538 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GBF1Q92538 GPR89P-201ENST00000407924 1495 ntBASIC19.26■□□□□ 0.67
GBF1Q92538 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GBF1Q92538 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GBF1Q92538 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GBF1Q92538 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GBF1Q92538 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.25■□□□□ 0.67
GBF1Q92538 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.25■□□□□ 0.67
GBF1Q92538 HLA-J-202ENST00000469281 1241 ntBASIC19.25■□□□□ 0.67
GBF1Q92538 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.25■□□□□ 0.67
GBF1Q92538 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.25■□□□□ 0.67
GBF1Q92538 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.25■□□□□ 0.67
GBF1Q92538 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.25■□□□□ 0.67
GBF1Q92538 PMPCAP1-201ENST00000508114 1576 ntBASIC19.25■□□□□ 0.67
GBF1Q92538 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.25■□□□□ 0.67
GBF1Q92538 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GBF1Q92538 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GBF1Q92538 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GBF1Q92538 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.25■□□□□ 0.67
GBF1Q92538 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.25■□□□□ 0.67
GBF1Q92538 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GBF1Q92538 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GBF1Q92538 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GBF1Q92538 AC004817.3-201ENST00000602957 2129 ntBASIC19.25■□□□□ 0.67
GBF1Q92538 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
GBF1Q92538 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
GBF1Q92538 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
GBF1Q92538 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GBF1Q92538 AC005498.2-205ENST00000593218 784 ntBASIC19.24■□□□□ 0.67
GBF1Q92538 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
GBF1Q92538 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GBF1Q92538 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GBF1Q92538 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.24■□□□□ 0.67
GBF1Q92538 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GBF1Q92538 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GBF1Q92538 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.24■□□□□ 0.67
GBF1Q92538 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.24■□□□□ 0.67
GBF1Q92538 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GBF1Q92538 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GBF1Q92538 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
GBF1Q92538 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GBF1Q92538 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GBF1Q92538 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GBF1Q92538 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
GBF1Q92538 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GBF1Q92538 KRT18P65-201ENST00000439811 1286 ntBASIC19.24■□□□□ 0.67
GBF1Q92538 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
GBF1Q92538 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.24■□□□□ 0.67
GBF1Q92538 AC008687.5-201ENST00000593746 558 ntBASIC19.24■□□□□ 0.67
GBF1Q92538 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
GBF1Q92538 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
GBF1Q92538 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GBF1Q92538 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
GBF1Q92538 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.24■□□□□ 0.67
GBF1Q92538 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GBF1Q92538 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GBF1Q92538 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GBF1Q92538 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.23■□□□□ 0.67
GBF1Q92538 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GBF1Q92538 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.23■□□□□ 0.67
GBF1Q92538 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GBF1Q92538 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GBF1Q92538 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.23■□□□□ 0.67
GBF1Q92538 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GBF1Q92538 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GBF1Q92538 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GBF1Q92538 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms