Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 BX842568.4-201ENST00000421222 227 ntBASIC18.1■□□□□ 0.49
HMGB4Q8WW32 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 AC087289.5-201ENST00000586076 3175 ntBASIC18.1■□□□□ 0.49
HMGB4Q8WW32 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 AL356309.3-201ENST00000624132 1934 ntBASIC18.1■□□□□ 0.49
HMGB4Q8WW32 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 AC104109.2-201ENST00000602919 1418 ntBASIC18.09■□□□□ 0.49
HMGB4Q8WW32 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGB4Q8WW32 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGB4Q8WW32 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGB4Q8WW32 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGB4Q8WW32 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.49
HMGB4Q8WW32 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.49
HMGB4Q8WW32 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGB4Q8WW32 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
HMGB4Q8WW32 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.08■□□□□ 0.49
HMGB4Q8WW32 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
HMGB4Q8WW32 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 AC092910.1-201ENST00000482027 1129 ntBASIC18.08■□□□□ 0.48
HMGB4Q8WW32 AC112698.1-201ENST00000510299 916 ntBASIC18.08■□□□□ 0.48
HMGB4Q8WW32 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 OR7E14P-202ENST00000530490 1290 ntBASIC18.08■□□□□ 0.48
HMGB4Q8WW32 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 HLA-J-201ENST00000462773 1622 ntBASIC18.08■□□□□ 0.48
HMGB4Q8WW32 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGB4Q8WW32 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGB4Q8WW32 AC116562.4-201ENST00000641316 2276 ntBASIC18.07■□□□□ 0.48
HMGB4Q8WW32 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGB4Q8WW32 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HMGB4Q8WW32 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGB4Q8WW32 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGB4Q8WW32 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGB4Q8WW32 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGB4Q8WW32 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HMGB4Q8WW32 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
HMGB4Q8WW32 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms