Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC30.89■■■□□ 2.54
TRIM41Q8WV44 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
TRIM41Q8WV44 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TRIM41Q8WV44 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC30.88■■■□□ 2.53
TRIM41Q8WV44 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
TRIM41Q8WV44 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TRIM41Q8WV44 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC30.88■■■□□ 2.53
TRIM41Q8WV44 BX323043.1-201ENST00000641006 1765 ntBASIC30.88■■■□□ 2.53
TRIM41Q8WV44 COPE-202ENST00000349893 948 ntTSL 2 BASIC30.88■■■□□ 2.53
TRIM41Q8WV44 METTL26-204ENST00000397665 558 ntTSL 2 BASIC30.88■■■□□ 2.53
TRIM41Q8WV44 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC30.88■■■□□ 2.53
TRIM41Q8WV44 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC30.88■■■□□ 2.53
TRIM41Q8WV44 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
TRIM41Q8WV44 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC30.88■■■□□ 2.53
TRIM41Q8WV44 PPOX-214ENST00000535223 664 ntTSL 3 BASIC30.88■■■□□ 2.53
TRIM41Q8WV44 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
TRIM41Q8WV44 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC30.88■■■□□ 2.53
TRIM41Q8WV44 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TRIM41Q8WV44 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC30.88■■■□□ 2.53
TRIM41Q8WV44 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
TRIM41Q8WV44 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 AC004832.2-201ENST00000426397 482 ntBASIC30.87■■■□□ 2.53
TRIM41Q8WV44 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 IRF8-202ENST00000562492 946 ntTSL 3 BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 ASL-204ENST00000395331 1538 ntTSL 5 BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 LINC01126-201ENST00000623515 1646 ntBASIC30.87■■■□□ 2.53
TRIM41Q8WV44 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC30.87■■■□□ 2.53
TRIM41Q8WV44 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 DDT-203ENST00000403754 569 ntTSL 3 BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 HNRNPDP1-201ENST00000439535 754 ntBASIC30.86■■■□□ 2.53
TRIM41Q8WV44 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 CCNC-219ENST00000627680 896 ntTSL 5 BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 NARF-204ENST00000390006 1766 ntTSL 2 BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
TRIM41Q8WV44 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 METTL26-205ENST00000397666 726 ntTSL 2 BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC30.85■■■□□ 2.53
TRIM41Q8WV44 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC30.84■■■□□ 2.53
TRIM41Q8WV44 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
TRIM41Q8WV44 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC30.84■■■□□ 2.53
TRIM41Q8WV44 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC30.84■■■□□ 2.53
TRIM41Q8WV44 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
TRIM41Q8WV44 AC093503.3-201ENST00000624917 2352 ntBASIC30.84■■■□□ 2.53
TRIM41Q8WV44 AL353692.3-201ENST00000407031 1396 ntBASIC30.84■■■□□ 2.53
TRIM41Q8WV44 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC30.84■■■□□ 2.53
TRIM41Q8WV44 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
TRIM41Q8WV44 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
TRIM41Q8WV44 AC015922.1-201ENST00000421102 1152 ntBASIC30.84■■■□□ 2.53
TRIM41Q8WV44 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC30.84■■■□□ 2.53
TRIM41Q8WV44 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
TRIM41Q8WV44 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC30.84■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms