Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
RNF139Q8WU17 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF139Q8WU17 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RNF139Q8WU17 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF139Q8WU17 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF139Q8WU17 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF139Q8WU17 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF139Q8WU17 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RNF139Q8WU17 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF139Q8WU17 AC016734.2-201ENST00000624325 1377 ntBASIC18.99■□□□□ 0.63
RNF139Q8WU17 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
RNF139Q8WU17 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF139Q8WU17 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF139Q8WU17 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF139Q8WU17 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.99■□□□□ 0.63
RNF139Q8WU17 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.99■□□□□ 0.63
RNF139Q8WU17 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF139Q8WU17 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF139Q8WU17 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RNF139Q8WU17 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF139Q8WU17 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RNF139Q8WU17 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF139Q8WU17 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF139Q8WU17 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF139Q8WU17 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF139Q8WU17 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF139Q8WU17 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RNF139Q8WU17 AC093677.2-201ENST00000600169 1863 ntBASIC18.99■□□□□ 0.63
RNF139Q8WU17 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF139Q8WU17 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RNF139Q8WU17 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF139Q8WU17 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF139Q8WU17 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RNF139Q8WU17 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF139Q8WU17 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF139Q8WU17 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
RNF139Q8WU17 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RNF139Q8WU17 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RNF139Q8WU17 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF139Q8WU17 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF139Q8WU17 CHCHD2P8-201ENST00000429873 447 ntBASIC18.98■□□□□ 0.63
RNF139Q8WU17 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.98■□□□□ 0.63
RNF139Q8WU17 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.98■□□□□ 0.63
RNF139Q8WU17 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF139Q8WU17 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF139Q8WU17 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF139Q8WU17 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF139Q8WU17 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
RNF139Q8WU17 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF139Q8WU17 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RNF139Q8WU17 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF139Q8WU17 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF139Q8WU17 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF139Q8WU17 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF139Q8WU17 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RNF139Q8WU17 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 AL390961.4-201ENST00000623958 2535 ntBASIC18.97■□□□□ 0.63
RNF139Q8WU17 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RNF139Q8WU17 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.97■□□□□ 0.63
RNF139Q8WU17 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RNF139Q8WU17 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 GUSBP12-201ENST00000513727 720 ntBASIC18.97■□□□□ 0.63
RNF139Q8WU17 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.97■□□□□ 0.63
RNF139Q8WU17 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
RNF139Q8WU17 AC090616.6-201ENST00000582640 721 ntBASIC18.97■□□□□ 0.63
RNF139Q8WU17 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF139Q8WU17 IGHV3-41-201ENST00000613121 348 ntBASIC18.97■□□□□ 0.63
RNF139Q8WU17 ABALON-201ENST00000629058 1903 ntBASIC18.97■□□□□ 0.63
RNF139Q8WU17 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
RNF139Q8WU17 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
RNF139Q8WU17 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF139Q8WU17 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF139Q8WU17 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
RNF139Q8WU17 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF139Q8WU17 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RNF139Q8WU17 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF139Q8WU17 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF139Q8WU17 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF139Q8WU17 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF139Q8WU17 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF139Q8WU17 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms