Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRPM4Q8TD43 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRPM4Q8TD43 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TRPM4Q8TD43 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRPM4Q8TD43 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRPM4Q8TD43 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.32■■□□□ 1
TRPM4Q8TD43 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.32■■□□□ 1
TRPM4Q8TD43 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRPM4Q8TD43 CEND1P1-201ENST00000451006 455 ntBASIC21.32■■□□□ 1
TRPM4Q8TD43 LHX6-205ENST00000464484 666 ntTSL 2 BASIC21.32■■□□□ 1
TRPM4Q8TD43 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.32■■□□□ 1
TRPM4Q8TD43 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TRPM4Q8TD43 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
TRPM4Q8TD43 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
TRPM4Q8TD43 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
TRPM4Q8TD43 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
TRPM4Q8TD43 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRPM4Q8TD43 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRPM4Q8TD43 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
TRPM4Q8TD43 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
TRPM4Q8TD43 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.32■■□□□ 1
TRPM4Q8TD43 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.32■■□□□ 1
TRPM4Q8TD43 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.31■■□□□ 1
TRPM4Q8TD43 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRPM4Q8TD43 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TRPM4Q8TD43 AC132938.6-201ENST00000623828 1655 ntBASIC21.31■■□□□ 1
TRPM4Q8TD43 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRPM4Q8TD43 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRPM4Q8TD43 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRPM4Q8TD43 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRPM4Q8TD43 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRPM4Q8TD43 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRPM4Q8TD43 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRPM4Q8TD43 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.31■■□□□ 1
TRPM4Q8TD43 MKNK2P1-201ENST00000437526 628 ntBASIC21.31■■□□□ 1
TRPM4Q8TD43 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
TRPM4Q8TD43 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.31■■□□□ 1
TRPM4Q8TD43 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRPM4Q8TD43 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRPM4Q8TD43 AC093028.1-201ENST00000622998 982 ntBASIC21.31■■□□□ 1
TRPM4Q8TD43 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRPM4Q8TD43 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRPM4Q8TD43 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.31■■□□□ 1
TRPM4Q8TD43 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.31■■□□□ 1
TRPM4Q8TD43 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRPM4Q8TD43 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRPM4Q8TD43 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRPM4Q8TD43 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRPM4Q8TD43 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21.3■■□□□ 1
TRPM4Q8TD43 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRPM4Q8TD43 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.3■■□□□ 1
TRPM4Q8TD43 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.3■■□□□ 1
TRPM4Q8TD43 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.3■■□□□ 1
TRPM4Q8TD43 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRPM4Q8TD43 AL031432.2-201ENST00000566714 459 ntBASIC21.3■■□□□ 1
TRPM4Q8TD43 AL928711.1-201ENST00000570165 459 ntBASIC21.3■■□□□ 1
TRPM4Q8TD43 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.3■■□□□ 1
TRPM4Q8TD43 AL589182.2-201ENST00000619332 1049 ntBASIC21.3■■□□□ 1
TRPM4Q8TD43 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
TRPM4Q8TD43 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
TRPM4Q8TD43 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRPM4Q8TD43 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.3■■□□□ 1
TRPM4Q8TD43 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
TRPM4Q8TD43 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.29■■□□□ 1
TRPM4Q8TD43 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.29■■□□□ 1
TRPM4Q8TD43 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.29■■□□□ 1
TRPM4Q8TD43 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.29■■□□□ 1
TRPM4Q8TD43 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRPM4Q8TD43 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.29■■□□□ 1
TRPM4Q8TD43 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TRPM4Q8TD43 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRPM4Q8TD43 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.29■■□□□ 1
TRPM4Q8TD43 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRPM4Q8TD43 AC096633.1-201ENST00000422446 749 ntBASIC21.29■■□□□ 1
TRPM4Q8TD43 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.29■■□□□ 1
TRPM4Q8TD43 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRPM4Q8TD43 AC122714.2-201ENST00000502787 707 ntBASIC21.29■■□□□ 1
TRPM4Q8TD43 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.29■■□□□ 1
TRPM4Q8TD43 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.29■■□□□ 1
TRPM4Q8TD43 SPCS2P1-201ENST00000561636 679 ntBASIC21.29■■□□□ 1
TRPM4Q8TD43 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.29■■□□□ 1
TRPM4Q8TD43 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.29■■□□□ 1
TRPM4Q8TD43 AC011467.4-201ENST00000594891 528 ntBASIC21.29■■□□□ 1
TRPM4Q8TD43 AC073592.5-201ENST00000624854 528 ntBASIC21.29■■□□□ 1
TRPM4Q8TD43 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TRPM4Q8TD43 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRPM4Q8TD43 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRPM4Q8TD43 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRPM4Q8TD43 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TRPM4Q8TD43 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.29■■□□□ 1
TRPM4Q8TD43 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRPM4Q8TD43 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.29■■□□□ 1
TRPM4Q8TD43 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.29■■□□□ 1
TRPM4Q8TD43 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.29■■□□□ 1
TRPM4Q8TD43 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRPM4Q8TD43 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRPM4Q8TD43 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.28■■□□□ 1
TRPM4Q8TD43 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRPM4Q8TD43 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.28■■□□□ 1
TRPM4Q8TD43 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms