Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.1■□□□□ 0.33
CARFQ8N187 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.1■□□□□ 0.33
CARFQ8N187 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CARFQ8N187 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CARFQ8N187 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.1■□□□□ 0.33
CARFQ8N187 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CARFQ8N187 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.1■□□□□ 0.33
CARFQ8N187 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CARFQ8N187 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CARFQ8N187 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CARFQ8N187 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CARFQ8N187 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.1■□□□□ 0.33
CARFQ8N187 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.09■□□□□ 0.33
CARFQ8N187 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CARFQ8N187 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CARFQ8N187 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CARFQ8N187 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CARFQ8N187 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CARFQ8N187 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CARFQ8N187 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CARFQ8N187 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CARFQ8N187 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CARFQ8N187 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CARFQ8N187 AC007967.3-201ENST00000434308 558 ntBASIC17.09■□□□□ 0.33
CARFQ8N187 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.09■□□□□ 0.33
CARFQ8N187 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.09■□□□□ 0.33
CARFQ8N187 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
CARFQ8N187 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.09■□□□□ 0.33
CARFQ8N187 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.09■□□□□ 0.33
CARFQ8N187 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.09■□□□□ 0.33
CARFQ8N187 AC008608.2-201ENST00000606089 416 ntBASIC17.09■□□□□ 0.33
CARFQ8N187 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.09■□□□□ 0.33
CARFQ8N187 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CARFQ8N187 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.09■□□□□ 0.33
CARFQ8N187 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CARFQ8N187 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.09■□□□□ 0.33
CARFQ8N187 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CARFQ8N187 AL096828.2-201ENST00000567259 1965 ntBASIC17.09■□□□□ 0.33
CARFQ8N187 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
CARFQ8N187 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CARFQ8N187 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CARFQ8N187 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.09■□□□□ 0.33
CARFQ8N187 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.09■□□□□ 0.33
CARFQ8N187 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CARFQ8N187 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CARFQ8N187 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CARFQ8N187 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.08■□□□□ 0.33
CARFQ8N187 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CARFQ8N187 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.08■□□□□ 0.33
CARFQ8N187 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CARFQ8N187 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CARFQ8N187 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CARFQ8N187 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CARFQ8N187 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.08■□□□□ 0.32
CARFQ8N187 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CARFQ8N187 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CARFQ8N187 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.08■□□□□ 0.32
CARFQ8N187 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.08■□□□□ 0.32
CARFQ8N187 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.08■□□□□ 0.32
CARFQ8N187 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CARFQ8N187 AC103564.2-201ENST00000432853 1299 ntBASIC17.08■□□□□ 0.32
CARFQ8N187 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.08■□□□□ 0.32
CARFQ8N187 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CARFQ8N187 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CARFQ8N187 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
CARFQ8N187 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CARFQ8N187 AC093503.3-201ENST00000624917 2352 ntBASIC17.08■□□□□ 0.32
CARFQ8N187 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CARFQ8N187 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CARFQ8N187 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CARFQ8N187 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CARFQ8N187 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CARFQ8N187 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CARFQ8N187 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CARFQ8N187 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CARFQ8N187 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CARFQ8N187 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.07■□□□□ 0.32
CARFQ8N187 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CARFQ8N187 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CARFQ8N187 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CARFQ8N187 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CARFQ8N187 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.07■□□□□ 0.32
CARFQ8N187 AP005117.1-201ENST00000584346 1413 ntBASIC17.07■□□□□ 0.32
CARFQ8N187 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.07■□□□□ 0.32
CARFQ8N187 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CARFQ8N187 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CARFQ8N187 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.07■□□□□ 0.32
CARFQ8N187 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CARFQ8N187 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CARFQ8N187 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.07■□□□□ 0.32
CARFQ8N187 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.07■□□□□ 0.32
CARFQ8N187 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.07■□□□□ 0.32
CARFQ8N187 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.07■□□□□ 0.32
CARFQ8N187 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CARFQ8N187 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.07■□□□□ 0.32
CARFQ8N187 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CARFQ8N187 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CARFQ8N187 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.07■□□□□ 0.32
CARFQ8N187 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CARFQ8N187 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms