Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 AC005521.1-201ENST00000393351 872 ntBASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 COX11P1-201ENST00000489116 835 ntBASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 AL441883.1-201ENST00000566170 1045 ntBASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 AC140113.3-201ENST00000605663 199 ntBASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE9Q8IYJ1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 KRT18P57-201ENST00000443599 1254 ntBASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE9Q8IYJ1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 AC073508.3-201ENST00000619697 1419 ntBASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 PVRIG2P-201ENST00000435460 978 ntBASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 AC034232.1-201ENST00000506026 1064 ntBASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 AC139887.4-201ENST00000607877 719 ntBASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE9Q8IYJ1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
CPNE9Q8IYJ1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CPNE9Q8IYJ1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CPNE9Q8IYJ1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms