Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 AL031598.1-201ENST00000561511 1773 ntBASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 LINC00265-3P-201ENST00000447588 903 ntBASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM48Q8IWZ4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 AP002383.4-201ENST00000442518 975 ntBASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 PRELID1P1-202ENST00000567272 903 ntBASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 CLEC4GP1-201ENST00000596555 870 ntBASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 AC004263.2-201ENST00000617183 678 ntBASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM48Q8IWZ4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 VENTXP7-201ENST00000475503 772 ntBASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM48Q8IWZ4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms