Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 AC002347.1-201ENST00000569543 541 ntBASIC19.53■□□□□ 0.72
HERC6Q8IVU3 NKAPP1-205ENST00000585790 367 ntBASIC19.53■□□□□ 0.72
HERC6Q8IVU3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 MTDHP4-201ENST00000600287 670 ntBASIC19.53■□□□□ 0.72
HERC6Q8IVU3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 AC107918.4-202ENST00000641623 219 ntBASIC19.53■□□□□ 0.72
HERC6Q8IVU3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 AC093484.2-201ENST00000580996 2166 ntBASIC19.53■□□□□ 0.72
HERC6Q8IVU3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HERC6Q8IVU3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 DNAJB3-202ENST00000449667 1266 ntBASIC19.52■□□□□ 0.72
HERC6Q8IVU3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
HERC6Q8IVU3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HERC6Q8IVU3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
HERC6Q8IVU3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HERC6Q8IVU3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
HERC6Q8IVU3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
HERC6Q8IVU3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
HERC6Q8IVU3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.52■□□□□ 0.71
HERC6Q8IVU3 AL032819.2-201ENST00000624543 2162 ntBASIC19.51■□□□□ 0.71
HERC6Q8IVU3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 AL024508.2-201ENST00000607749 1894 ntBASIC19.51■□□□□ 0.71
HERC6Q8IVU3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.51■□□□□ 0.71
HERC6Q8IVU3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms